First version including the rRNA detector
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77 Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
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25350
data/rrna/23S.goodali.fst
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25350
data/rrna/23S.goodali.fst
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@ -1,381 +0,0 @@
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CLUSTAL W (1.7) multiple sequence alignment
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NC_000932_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_001320_LCS taaggtagcggcgagacgagccg-------------------------------------
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NC_004677_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_008115_LCS gaaggtcacggcgagacgagctg-------------------------------------
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NC_006290_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_007942_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_026134_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_011828_LCS gaaggtcacggcgagactagccg-------------------------------------
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NC_009618_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_002693_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_005086_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_009259_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_024021_LCS --aggtcatggcgagacgagccg-------------------------------------
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NC_008335_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_026295_LCS --aggtcacggcgagacgagccg-------------------------------------
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NC_016708_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_008796_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_010442_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_021425_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_007407_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_015891_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_016064_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_001631_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_005087_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_021449_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_023119_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_023090_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_015621_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_009271_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_003119_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_007144_LCS gaaggtcacggcgagatgagccg-------------------------------------
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NC_009766_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_025744_LCS -aaggtcacggcgagactagccg-------------------------------------
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NC_001568_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_009765_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_017006_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_008829_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_014676_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_025236_LCS taaggtagcggcgagacgagccg-------------------------------------
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NC_023533_LCS taaggtagcggcgagacgagccg-------------------------------------
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NC_014062_LCS taaggtagcggcgagacgagccg-------------------------------------
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NC_020321_LCS taaggtcaaggcgagacgagcct-------------------------------------
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NC_012818_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_022137_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_014348_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_024158_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_014699_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_010109_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_014592_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_014675_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_024291_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_019628_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_020146_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_015402_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_004766_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_012052_LCS taaggtcacggcaagacgagccg-------------------------------------
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NC_001319_LCS taaggtcacggcaagactagccg-------------------------------------
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NC_004543_LCS taaggtcacggcaagatgagccg-------------------------------------
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NC_020259_LCS taaggtcacggcaagatgagccg-------------------------------------
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NC_025659_LCS taaggtcacggcgagacgagcca-------------------------------------
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NC_026775_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_026773_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_025305_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_011954_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_026301_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_010654_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_026778_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_021936_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_026776_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_014056_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_026449_LCS taaggtcacggcgagacgagccg-------------------------------------
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NC_024945_LCS taaggtcacggcgagatgagccg-------------------------------------
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NC_026785_LCS taaggtcacggctagacgagccg-------------------------------------
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NC_023805_LCS taaggtcacggtgagactagccg-------------------------------------
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NC_024827_LCS taaggtcacggtgagactagccg-------------------------------------
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NC_020365_LCS taaggtcacgtcgagacgagccg-------------------------------------
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NC_010548_LCS taaggtcatggcgagacgagccg-------------------------------------
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NC_013086_LCS tgaggtcacggcaagatgagccg-------------------------------------
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NC_006861_LCS -aaggtcacggcaagacgagccg-------------------------------------
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NC_003386_LCS -aaggtcacggcaagacgagccg-------------------------------------
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NC_016471_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_010359_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_020372_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_014582_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_024421_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_018114_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_026847_LCS -aaggtcacggcgagacgagccg-------------------------------------
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NC_023120_LCS -aaggtcacggtgagactagccg-------------------------------------
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NC_014874_LCS -aaggtcacggttagacgagccg-------------------------------------
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NC_011942_LCS -------------agacgagccg-------------------------------------
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NC_016065_LCS agaggtcttggcgagactagcca-------------------------------------
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NC_022136_LCS caaggtcacggcgagacgagccg-------------------------------------
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NC_014063_LCS caaggtcacggcgagacgagccg-------------------------------------
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NC_023121_LCS -caggtcacggcgagacgagccg-------------------------------------
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NC_021110_LCS cgaggtcacggcgagacgagccg-------------------------------------
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NC_016063_LCS cgaggtcacggcgagacgagccg-------------------------------------
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NC_025642_LCS gaaggtcacggcgagacgagcca-------------------------------------
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NC_026202_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_009266_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_002202_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_025554_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_021111_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_023359_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_010776_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_024635_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_025907_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_008336_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_022457_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_023259_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_025909_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_024038_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_014057_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_002694_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_010433_LCS_CMP gaaggtcacggcgagacgagccg-------------------------------------
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NC_001666_LCS_CMP taaggtagcggcgagacgagccg-------------------------------------
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NC_013991_LCS_CMP taaggtcacggcgagacgagccg-------------------------------------
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NC_024168_LCS_CMP --aggtcacggcaagacgagccg-------------------------------------
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NC_023356_LCS_CMP taaggtcacggcgagacgagccg-------------------------------------
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NC_013707_LCS_CMP gaaggtcacggcgagacgagccg-------------------------------------
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NC_021372_LCS taaggtagcggcgagacgagccg-------------------------------------
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NC_007578_LCS gaaggtcacggcgagacgagccg-------------------------------------
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NC_008454_LCS gaaggtcacggcgagacgagccg------------------tttatcatattactcaatt
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NC_014569_LCS gaaggtcacggcgagacgagccgtttgttttagagtgtcaaagtcttgagaattcaggcg
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NC_026448_LCS taaggtcgcggcgagatgatccg-------------------------------------
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NC_000932_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_001320_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_004677_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_008115_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_006290_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_007942_LCS ----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026134_LCS ----------tttatcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_011828_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
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NC_009618_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
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NC_002693_LCS ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_005086_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_009259_LCS ----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_024021_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
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NC_008335_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026295_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
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NC_016708_LCS ----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_008796_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_010442_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_021425_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_007407_LCS ----------tttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
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NC_015891_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_016064_LCS ----------tttatcatt---acgataggtgtcaagtggaagtacagtgatgtatg-ca
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NC_001631_LCS ----------tttataatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_005087_LCS ----------tttatcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_021449_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_023119_LCS ----------tttttcatt---ccgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_023090_LCS ----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_015621_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_009271_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_003119_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
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NC_007144_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_009766_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_025744_LCS -----------ttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
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NC_001568_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_009765_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_017006_LCS ----------tttatcacc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_008829_LCS ----------tttatcact---acgataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_014676_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_025236_LCS ----------ttta----------aataggtgtcaagtggaagtacagtgatgtatg-ca
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NC_023533_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_014062_LCS ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_020321_LCS ----------tttatcaa----acgataggtatcaagtggaagtgcagtgatgtacg-ca
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NC_012818_LCS ----------tttatcacc---acgataggtgccaagtggaggtgcagtaatgtatg-ca
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NC_022137_LCS ----------tttatcacc---acgataggtgccaagtggaggtgcagtgatgcatg-ca
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NC_014348_LCS ----------tttatcact---acgataggtgctaagtggaggtgcagtaatgtatg-ca
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NC_024158_LCS ----------tttatcatc---acgataggtgccaggtggaagtgcagtaatgtatg-ca
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NC_014699_LCS ----------tttatcatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
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NC_010109_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_014592_LCS ----------tttatcgcc---acaataggtgctaagtggaggtgcagtaatgtatg-ca
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NC_014675_LCS ----------tttatcgtc---acgataggtgccaagtggaagtgcagtaatgcatg-ca
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NC_024291_LCS ----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_019628_LCS ----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ta
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NC_020146_LCS ----------tttatgatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
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NC_015402_LCS ----------tttattata---acgataggtgccaagtggaagtgcagtaatgtatg-ta
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NC_004766_LCS ----------tttctcact---acgataggtgctaagtggaagtgcagtaatgtatg-ca
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NC_012052_LCS ----------tttgttatt---acgataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_001319_LCS ----------tttattttt---acgataggtgccaagtggaagtgcagtaatgtatg-ta
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NC_004543_LCS ----------tttatcata---acaataggtgccaagtagaagtgcagtaatgtatg-ca
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NC_020259_LCS ----------tttatcata---acaataggtgccaagtggaagtgcagtaatgtatg-ca
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NC_025659_LCS ----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026775_LCS ----------cttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
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NC_026773_LCS ----------cttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_025305_LCS --------------ttatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_011954_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
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NC_026301_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
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NC_010654_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtgatgtatg-ca
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NC_026778_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_021936_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026776_LCS ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_014056_LCS ----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026449_LCS ----------tgtatcaac---attataggtgccgagtgtaagtgcggcgatgcatg-ca
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NC_024945_LCS ----------tttatcag----acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_026785_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_023805_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
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NC_024827_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
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NC_020365_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
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NC_010548_LCS ----------tttattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
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NC_013086_LCS ----------tttatcata---acgataggtgccaggtggaagtgcagtcatgtacg-ca
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|
||||||
NC_006861_LCS ----------tttatcatc---acgataggtgccaagtggaaatacagtaatgtatg-ca
|
|
||||||
NC_003386_LCS ----------tttattatc---acgataggtgccaagtggaagtgcagtaatgtacg-ca
|
|
||||||
NC_016471_LCS ----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_010359_LCS ----------tttatcatc---acgataggtgccaggtggaagtgcagtgatgtatg-ta
|
|
||||||
NC_020372_LCS ----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_014582_LCS ----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_024421_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
|
||||||
NC_018114_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_026847_LCS ----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_023120_LCS ----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
|
||||||
NC_014874_LCS ----------tttattatt---atgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
NC_011942_LCS ----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
|
||||||
NC_016065_LCS ----------gcgattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
NC_022136_LCS ----------tttctcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
|
||||||
NC_014063_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
|
||||||
NC_023121_LCS ----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
NC_021110_LCS ----------tttatcag----acgataggtgttaagtgaaagtacagtgatgtatg-ca
|
|
||||||
NC_016063_LCS ----------tttatcag----acgataggtgttaagtgaaagtgcagtgatgtatg-ca
|
|
||||||
NC_025642_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
NC_026202_LCS ----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_009266_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
NC_002202_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_025554_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgtagtgatgtatg-ca
|
|
||||||
NC_021111_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
NC_023359_LCS ----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
NC_010776_LCS ----------tttatcatt---acgataggtgtcaggtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_024635_LCS ----------tttatcatt---ataataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_025907_LCS ----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_008336_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
|
||||||
NC_022457_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_023259_LCS ----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_025909_LCS ----------tttctaatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_024038_LCS ----------tttctaatt--aacgataggtgtcaggtggaagtgcagtaatgtacg-ca
|
|
||||||
NC_014057_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtacagtaatgtatg-ca
|
|
||||||
NC_002694_LCS ----------tttttcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_010433_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_001666_LCS_CMP ----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_013991_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_024168_LCS_CMP ----------tttt---ag---acaataggtgccaggtggaagcgcagtaatgtgtg-ca
|
|
||||||
NC_023356_LCS_CMP ----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_013707_LCS_CMP ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_021372_LCS ----------ttt----------aaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_007578_LCS ----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_008454_LCS gatcattacgtttatcatt---acgataggtgttaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_014569_LCS cggcccgtcctttagagcaaaacaaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
NC_026448_LCS ----------ttgatagtgactatgataggtactaagtgtaaatgcagcgatgtatgtta
|
|
||||||
|
|
||||||
|
|
||||||
NC_000932_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_001320_LCS gctgaggcatcctaac-gaacgaacgatttgaac-
|
|
||||||
NC_004677_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_008115_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_006290_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_007942_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_026134_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_011828_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_009618_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_002693_LCS gctgagacatcctaacagaccgctagacttgaac-
|
|
||||||
NC_005086_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_009259_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
|
||||||
NC_024021_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
|
||||||
NC_008335_LCS gctgaggcatcctaacagaccga------------
|
|
||||||
NC_026295_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
|
||||||
NC_016708_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_008796_LCS gctgaggcatcctaacagaccaatagacttgaac-
|
|
||||||
NC_010442_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_021425_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
|
||||||
NC_007407_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_015891_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_016064_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_001631_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_005087_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_021449_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_023119_LCS gctgaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
NC_023090_LCS gcggaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_015621_LCS gctgaggcatcctaacagaccggtagact------
|
|
||||||
NC_009271_LCS gctgaggcatcctaacagaccggtagacttgaa--
|
|
||||||
NC_003119_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_007144_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_009766_LCS gctgaggcatcctaatagaccggtagacttgaac-
|
|
||||||
NC_025744_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_001568_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_009765_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_017006_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_008829_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_014676_LCS gctgaggcatcctaacagaccggcagacttgaac-
|
|
||||||
NC_025236_LCS gctgaggcatcctaac-gaacgaacgatttgaac-
|
|
||||||
NC_023533_LCS gctgaggcatcctaaccaa-cgaacgatttgaac-
|
|
||||||
NC_014062_LCS gctgaggcatcctaat-gaacgaacgatttgaac-
|
|
||||||
NC_020321_LCS gctgaggcatcctaacagaccgaaagattttaac-
|
|
||||||
NC_012818_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_022137_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_014348_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_024158_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_014699_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_010109_LCS gctgagacatcctaacagaccgagagatttgaac-
|
|
||||||
NC_014592_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_014675_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_024291_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_019628_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_020146_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_015402_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_004766_LCS gctgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_012052_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_001319_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_004543_LCS gctgaggcattctaacagaccgagagatttgaac-
|
|
||||||
NC_020259_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_025659_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_026775_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_026773_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_025305_LCS gctgaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
NC_011954_LCS gctgagacatcctaacagaccgagagatttgaac-
|
|
||||||
NC_026301_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
NC_010654_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
NC_026778_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_021936_LCS gctgaggcattctaacagaccgagagatttgaac-
|
|
||||||
NC_026776_LCS gctgaggcatcctaatagaccgagagatttgaac-
|
|
||||||
NC_014056_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_026449_LCS gctgaggcatactaaaagaccgatatattttaac-
|
|
||||||
NC_024945_LCS gctgaggcatcctaacagactaaaagatttgaac-
|
|
||||||
NC_026785_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_023805_LCS gctaaggcatcctaatagaccgaaagatttgaac-
|
|
||||||
NC_024827_LCS gctaaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
NC_020365_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_010548_LCS gccgaggcatcctaagagaccggaagatttgaac-
|
|
||||||
NC_013086_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_006861_LCS gctgaggcatcctaacagaccaagagatttgaacc
|
|
||||||
NC_003386_LCS gctgaggcatcctaacagaccgatggctttgaacc
|
|
||||||
NC_016471_LCS gctgaggcatcctaacagaccaagagatttgaac-
|
|
||||||
NC_010359_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_020372_LCS gctgaggcatcctaacagaccgatagatttgaac-
|
|
||||||
NC_014582_LCS gctgaggcatcctaacagaccagtagacttgaac-
|
|
||||||
NC_024421_LCS gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_018114_LCS gctgaggcatcctaacagaccgagagatttgaacc
|
|
||||||
NC_026847_LCS gctgaggcatcctaacagaccgcaagacttga---
|
|
||||||
NC_023120_LCS gctaaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
NC_014874_LCS gctgaggcatactaacagaccgagagattttaacc
|
|
||||||
NC_011942_LCS gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
NC_016065_LCS gccgagacatcctaagagaccaaaagatttgaac-
|
|
||||||
NC_022136_LCS gctgaggcatcctaacagaccggaagatttgaac-
|
|
||||||
NC_014063_LCS gctgagtcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_023121_LCS gccgaggcatactaaaagaccgaaagatttgaac-
|
|
||||||
NC_021110_LCS gccaaggcatcctaacagaccga-agatttgaacc
|
|
||||||
NC_016063_LCS gccaaggcatcctaacagaccga-agatttgaacc
|
|
||||||
NC_025642_LCS gctgagacatcctaacagaccggtagacttgaac-
|
|
||||||
NC_026202_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_009266_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_002202_LCS gctgaggcatcctaacagacccacagacttgaac-
|
|
||||||
NC_025554_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_021111_LCS gctgagacatcctaacagaccggtagacttgaac-
|
|
||||||
NC_023359_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_010776_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_024635_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_025907_LCS gctgaggcatcctaacagaccacaagacttgaac-
|
|
||||||
NC_008336_LCS gctgaggcatcctaacagaccgacagacttgaac-
|
|
||||||
NC_022457_LCS gctgaggcatcctaacagaccgccagacttgaac-
|
|
||||||
NC_023259_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_025909_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_024038_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_014057_LCS gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
NC_002694_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_010433_LCS_CMP gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_001666_LCS_CMP gctgaggcatcctaac-gaacgaacgatttgaac-
|
|
||||||
NC_013991_LCS_CMP gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
NC_024168_LCS_CMP gccgaggcatcctaacagaccgagaggtttgaac-
|
|
||||||
NC_023356_LCS_CMP gctgaggcatcctaacagaccgatagatttgaac-
|
|
||||||
NC_013707_LCS_CMP gctgaggcatcctaacagaccggtagacttgaa--
|
|
||||||
NC_021372_LCS gctgaggcatcctaacgaac-gaacgatttgaac-
|
|
||||||
NC_007578_LCS gctgaggcatcctaacagaccggtagacttgaacc
|
|
||||||
NC_008454_LCS gctgaggcatcctaacagaccgttagacttgaac-
|
|
||||||
NC_014569_LCS gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
NC_026448_LCS gcttaggtatcctaaaagaccgatttatttgaac-
|
|
||||||
|
|
||||||
|
|
@ -1,496 +1,252 @@
|
|||||||
>NC_000932_LCS count=162; cluster_center=True; seq_length=103; cluster=NC_000932_LCS; cluster_score=1.0; cluster_weight=559;
|
>RRNA4.5S_NC_010548_83 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.902913; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
TAAGGTCATGGCGAGACGAGCCG--TTTATTAG--ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGCATGCAGCCGAGGCATCCTAAGAGACCGGAAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_022136_103 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932039; cluster_center=False;
|
||||||
>NC_001320_LCS count=84; cluster_center=False; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.847619; cluster_weight=559;
|
CAAGGTCACGGCGAGACGAGCCG--TTTCTCATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGGAAGATTTGAAC
|
||||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_012052_62 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
gctgaggcatcctaac-gaacgaacgatttgaac-
|
TAAGGTCACGGCAAGACGAGCCG--TTTGTTATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
>NC_004677_LCS count=72; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.961538; cluster_weight=559;
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_020259_65 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
TAAGGTCACGGCAAGATGAGCCG--TTTATCATA-ACAATAGGTGCCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_008115_LCS count=39; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_015402_60 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagctg-------------------------------------
|
TAAGGTCACGGCAAGACGAGCCG--TTTATTATA-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTAATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_008829_37 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
>NC_006290_LCS count=17; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCACT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGGTTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_014675_56 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCGTC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
>NC_007942_LCS count=10; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.961538; Strand=0; cluster_weight=559;
|
GTAATGCATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_024158_52 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_026134_LCS count=6; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.990385; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_020146_59 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
TAAGGTCACGGCAAGACGAGCCG--TTTATGATT-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||||
----------tttatcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_014699_53 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||||
>NC_011828_LCS count=6; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; cluster_weight=559;
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||||
gaaggtcacggcgagactagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
>RRNA4.5S_NC_017006_34 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCACC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
>NC_009618_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_005087_28 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_002693_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_019628_58 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.903846; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
TAAGGTCACGGCAAGACGAGCCG--TTTATGATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTAATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgagacatcctaacagaccgctagacttgaac-
|
>RRNA4.5S_NC_024291_57 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.913462; cluster_center=False;
|
||||||
>NC_005086_LCS count=5; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCAAGACGAGCCG--TTTATGATC-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_014063_104 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
CAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_009259_LCS count=4; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
GTAATGTATGCAGCTGAGTCATCCTAACAGACCGATAGACTTGAAC
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_014057_126 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
----------tttctaatt--aatgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTACA
|
||||||
gctgaggcatcctaacagaccgttagacttgaac-
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
>NC_024021_LCS count=4; cluster_center=False; seq_length=96; cluster=NC_000932_LCS; cluster_score=0.834951; Strand=1; cluster_weight=559;
|
>RRNA4.5S_NC_024035_9 count=6; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
--aggtcatggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACTAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
>RRNA4.5S_NC_025745_29 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
>NC_008335_LCS count=4; cluster_center=False; seq_length=91; cluster=NC_000932_LCS; cluster_score=0.883495; Strand=0; cluster_weight=559;
|
-AAGGTCACGGCGAGACTAGCCG---TTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_026847_97 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932039; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccga------------
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-CCAATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_026295_LCS count=4; cluster_center=False; seq_length=96; cluster=NC_000932_LCS; cluster_score=0.84466; Strand=1; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGCAAGACTTGA--
|
||||||
--aggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_025907_119 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951456; cluster_center=False;
|
||||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-CCAATAGGTGTCAAGTGGAAGTGCA
|
||||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCACAAGACTTGAAC
|
||||||
>NC_016708_LCS count=4; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.980769; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_026301_71 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.914286; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAGATGCA
|
||||||
----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTAATGTATGCAGCTGAGGCATCCTAAAAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_010654_72 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923810; cluster_center=False;
|
||||||
>NC_008796_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAGATGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAAAAGACCGAGAGATTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_010359_92 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.923077; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccaatagacttgaac-
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGCCAGGTGGAAGTGCA
|
||||||
>NC_010442_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
GTGATGTATGTAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_010360_11 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
GTGATGTATGCAGCTGAGACATCCTAACAGACCGCTAGACTTGAAC
|
||||||
>NC_021425_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_024038_124 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAACGATAGGTGTCAGGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTAATGTACGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccgttagacttgaac-
|
>RRNA4.5S_NC_008336_120 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961165; cluster_center=False;
|
||||||
>NC_007407_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGACAGACTTGAAC
|
||||||
----------tttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_022457_121 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_015891_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGCCAGACTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_025642_108 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCA--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGACATCCTAACAGACCGGTAGACTTGAAC
|
||||||
>NC_016064_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; cluster_weight=559;
|
>RRNA4.5S_NC_021111_115 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtacagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGACATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
>RRNA4.5S_NC_002202_112 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||||
>NC_001631_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCCACAGACTTGAAC
|
||||||
----------tttataatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_015983_30 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GAAGGTCACGGCGAGATGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_005087_LCS count=3; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_009259_14 count=4; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
----------tttatcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAATGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGTTAGACTTGAAC
|
||||||
>NC_021449_LCS count=3; cluster_center=False; seq_length=105; cluster=NC_000932_LCS; cluster_score=0.980952; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_025909_123 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_021646_7 count=10; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961538; cluster_center=False;
|
||||||
>NC_023119_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.941748; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTAATTAATGATAGGTGTCAAGTGGAAGTGCA
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
----------tttttcatt---ccgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_023259_122 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgaaagatttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATTATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_023090_LCS count=2; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_026202_109 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------tttctcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATAATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gcggaggcatcctaacagaccggtagacttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
>NC_015621_LCS count=2; cluster_center=False; seq_length=98; cluster=NC_000932_LCS; cluster_score=0.951456; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_026681_38 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCGGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagact------
|
>RRNA4.5S_NC_026676_17 count=4; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980769; cluster_center=False;
|
||||||
>NC_009271_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTCTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_001568_41 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccggtagacttgaa--
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_003119_LCS count=2; cluster_center=False; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_022391_4 count=39; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCTG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
>NC_007144_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_021423_39 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
gaaggtcacggcgagatgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGCAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_009963_42 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
>NC_009766_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAATAGACCGGTAGACTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_009266_111 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
gctgaggcatcctaatagaccggtagacttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_025744_LCS count=2; cluster_center=False; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
GTGATGCATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
-aaggtcacggcgagactagccg-------------------------------------
|
>RRNA4.5S_NC_025554_114 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
-----------ttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGTA
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
>NC_001568_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_026677_8 count=6; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990385; cluster_center=False;
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
>RRNA4.5S_NC_025652_20 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980952; cluster_center=False;
|
||||||
>NC_009765_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCGTTTTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_000932_1 count=162; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=1.000000; cluster_center=True;
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_017006_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_018565_33 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------tttatcacc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAA-
|
||||||
>NC_008829_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_023833_36 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951456; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcact---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACT-----
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
>RRNA4.5S_NC_003119_31 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.971154; cluster_center=False;
|
||||||
>NC_014676_LCS count=2; cluster_center=False; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
GTAATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_002694_127 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980769; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccggcagacttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTTTCATTAACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_025236_LCS count=1; cluster_center=False; cut=117439..117533; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.838095; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_021425_22 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------ttta----------aataggtgtcaagtggaagtacagtgatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaac-gaacgaacgatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGTTAGACTTGAAC
|
||||||
>NC_023533_LCS count=1; cluster_center=False; cut=117008..117102; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.839623; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_008796_27 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAATAGACTTGAAC
|
||||||
gctgaggcatcctaaccaa-cgaacgatttgaac-
|
>RRNA4.5S_NC_023359_116 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
>NC_014062_LCS count=1; cluster_center=False; cut=121161..121255; seq_length=95; cluster=NC_000932_LCS; cluster_score=0.838095; Strand=0; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGTAAGTGCA
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_010776_117 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
gctgaggcatcctaat-gaacgaacgatttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAGGTGGAAGTGCA
|
||||||
>NC_020321_LCS count=1; cluster_center=False; cut=101414..101515; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.893204; Strand=1; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
taaggtcaaggcgagacgagcct-------------------------------------
|
>RRNA4.5S_NC_023357_6 count=17; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------tttatcaa----acgataggtatcaagtggaagtgcagtgatgtacg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgaaagattttaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
>NC_012818_LCS count=1; cluster_center=False; cut=152550..152652; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
>RRNA4.5S_NC_014582_94 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.970874; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcacc---acgataggtgccaagtggaggtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAGTAGACTTGAAC
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
>RRNA4.5S_NC_024732_26 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
>NC_022137_LCS count=1; cluster_center=False; cut=150383..150485; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGACTTGAAC
|
||||||
----------tttatcacc---acgataggtgccaagtggaggtgcagtgatgcatg-ca
|
>RRNA4.5S_NC_024635_118 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.980583; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATAATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_014348_LCS count=1; cluster_center=False; cut=148751..148853; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.895238; Strand=1; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_009765_35 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.990291; cluster_center=False;
|
||||||
----------tttatcact---acgataggtgctaagtggaggtgcagtaatgtatg-ca
|
GAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC
|
||||||
>NC_024158_LCS count=1; cluster_center=False; cut=138359..138461; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_026450_32 count=2; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.941748; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
-AAGGTCACGGCGAGACGAGCCG--TTTTTCATT-CCGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcatc---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAAAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
>RRNA4.5S_NC_025305_69 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.922330; cluster_center=False;
|
||||||
>NC_014699_LCS count=1; cluster_center=False; cut=125720..125822; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCGAGACGAGCCG--TT----ATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAAAGATTTGAAC
|
||||||
----------tttatcatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
>RRNA4.5S_NC_025659_66 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCGAGACGAGCCA--TTTCTCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_010109_LCS count=1; cluster_center=False; cut=142992..143094; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_014056_76 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
TAAGGTCACGGCGAGACGAGCCG--TTTCTCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgagacatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_014592_LCS count=1; cluster_center=False; cut=152146..152248; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.866667; Strand=1; cluster_weight=559;
|
>RRNA4.5S_NC_020372_93 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961165; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcgcc---acaataggtgctaagtggaggtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGATAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
>RRNA4.5S_NC_024542_12 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
>NC_014675_LCS count=1; cluster_center=False; cut=134461..134563; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttatcgtc---acgataggtgccaagtggaagtgcagtaatgcatg-ca
|
>RRNA4.5S_NC_011954_70 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.932692; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_024291_LCS count=1; cluster_center=False; cut=119572..119674; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
GTGATGCATGCAGCTGAGACATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_009618_10 count=5; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATC-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGCATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_019628_LCS count=1; cluster_center=False; cut=113128..113230; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_020365_82 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
TAAGGTCACGTCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatgatc---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
>RRNA4.5S_NC_024421_95 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
>NC_020146_LCS count=1; cluster_center=False; cut=124175..124277; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GCGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttatgatt---acgataggtgccaggtggaagtgcagtaatgtatg-ca
|
>RRNA4.5S_NC_010109_54 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_015402_LCS count=1; cluster_center=False; cut=111547..111649; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGACATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
>RRNA4.5S_NC_015891_19 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
----------tttattata---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
TAAGGTCACGGCAAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_004766_LCS count=1; cluster_center=False; cut=146832..146934; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.895238; Strand=1; cluster_weight=559;
|
>RRNA4.5S_NC_026299_24 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
----------tttctcact---acgataggtgctaagtggaagtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccgagaggtttgaac-
|
>RRNA4.5S_NC_026773_68 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
>NC_012052_LCS count=1; cluster_center=False; cut=114432..114534; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.913462; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCGAGACGAGCCG--CTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcaagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttgttatt---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
>RRNA4.5S_NC_026775_67 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCGAGACGAGCCG--CTTATCATT-ACGATAGGTGCCAAGTGGAAGTGCA
|
||||||
>NC_001319_LCS count=1; cluster_center=False; cut=113188..113290; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcaagactagccg-------------------------------------
|
>RRNA4.5S_NC_026785_79 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
----------tttattttt---acgataggtgccaagtggaagtgcagtaatgtatg-ta
|
TAAGGTCACGGCTAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_004543_LCS count=1; cluster_center=False; cut=147535..147637; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.884615; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_026778_73 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
taaggtcacggcaagatgagccg-------------------------------------
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACAATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------tttatcata---acaataggtgccaagtagaagtgcagtaatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcattctaacagaccgagagatttgaac-
|
>RRNA4.5S_NC_025306_25 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
>NC_020259_LCS count=1; cluster_center=False; cut=144766..144868; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.903846; Strand=0; cluster_weight=559;
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTACA
|
||||||
taaggtcacggcaagatgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
----------tttatcata---acaataggtgccaagtggaagtgcagtaatgtatg-ca
|
>RRNA4.5S_NC_021936_74 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.951923; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_025659_LCS count=1; cluster_center=False; cut=124686..124788; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATTCTAACAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcgagacgagcca-------------------------------------
|
>RRNA4.5S_NC_025664_3 count=72; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.961538; cluster_center=False;
|
||||||
----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_026775_LCS count=1; cluster_center=False; cut=130118..130220; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
>RRNA4.5S_NC_018114_96 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.952381; cluster_center=False;
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
-AAGGTCACGGCGAGACGAGCCG--TTTATCATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
----------cttatcatt---acgataggtgccaagtggaagtgcagtgatgtatg-ca
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
>RRNA4.5S_NC_016471_91 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
>NC_026773_LCS count=1; cluster_center=False; cut=131757..131859; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
-AAGGTCACGGCGAGACGAGCCG--TTTATAATT-ACGATAGGTGTCAAGTGGAAGTGCA
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCAAGAGATTTGAAC
|
||||||
----------cttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
>RRNA4.5S_NC_026776_75 count=1; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
TAAGGTCACGGCGAGACGAGCCG--TTTATCATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||||
>NC_025305_LCS count=1; cluster_center=False; cut=135472..135570; seq_length=99; cluster=NC_000932_LCS; cluster_score=0.92233; Strand=0; cluster_weight=559;
|
GTGATGTATGCAGCTGAGGCATCCTAATAGACCGAGAGATTTGAAC
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
>RRNA4.5S_NC_001631_23 count=3; cluster_weight=438; cluster=RRNA4.5S_NC_000932_1; cluster_score=0.942308; cluster_center=False;
|
||||||
--------------ttatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
TAAGGTCACGGCGAGACGAGCCG--TTTATAATT-ATGATAGGTGTCAAGTGGAAGTGCA
|
||||||
gctgaggcatcctaacagaccgaaagatttgaac-
|
GTGATGTATGCAGCTGAGGCATCCTAACAGACCGAGAGATTTGAAC
|
||||||
>NC_011954_LCS count=1; cluster_center=False; cut=93045..93147; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.932692; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gctgagacatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_026301_LCS count=1; cluster_center=False; cut=97098..97200; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.914286; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
|
||||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
>NC_010654_LCS count=1; cluster_center=False; cut=101596..101698; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.92381; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
>NC_026778_LCS count=1; cluster_center=False; cut=126845..126947; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_021936_LCS count=1; cluster_center=False; cut=132851..132953; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcattctaacagaccgagagatttgaac-
|
|
||||||
>NC_026776_LCS count=1; cluster_center=False; cut=134622..134724; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaatagaccgagagatttgaac-
|
|
||||||
>NC_014056_LCS count=1; cluster_center=False; cut=122521..122623; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttctcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_026449_LCS count=1; cluster_center=False; cut=19564..19668; seq_length=105; cluster=NC_000932_LCS; cluster_score=0.813084; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tgtatcaac---attataggtgccgagtgtaagtgcggcgatgcatg-ca
|
|
||||||
gctgaggcatactaaaagaccgatatattttaac-
|
|
||||||
>NC_024945_LCS count=1; cluster_center=False; cut=109064..109165; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.896226; Strand=1; cluster_weight=559;
|
|
||||||
taaggtcacggcgagatgagccg-------------------------------------
|
|
||||||
----------tttatcag----acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagactaaaagatttgaac-
|
|
||||||
>NC_026785_LCS count=1; cluster_center=False; cut=132320..132422; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggctagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_023805_LCS count=1; cluster_center=False; cut=98463..98565; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacggtgagactagccg-------------------------------------
|
|
||||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctaaggcatcctaatagaccgaaagatttgaac-
|
|
||||||
>NC_024827_LCS count=1; cluster_center=False; cut=111970..112072; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=1; cluster_weight=559;
|
|
||||||
taaggtcacggtgagactagccg-------------------------------------
|
|
||||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
|
||||||
gctaaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
>NC_020365_LCS count=1; cluster_center=False; cut=133176..133278; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcacgtcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_010548_LCS count=1; cluster_center=False; cut=100631..100732; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.902913; Strand=0; cluster_weight=559;
|
|
||||||
taaggtcatggcgagacgagccg-------------------------------------
|
|
||||||
----------tttattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gccgaggcatcctaagagaccggaagatttgaac-
|
|
||||||
>NC_013086_LCS count=1; cluster_center=False; cut=137008..137110; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
|
||||||
tgaggtcacggcaagatgagccg-------------------------------------
|
|
||||||
----------tttatcata---acgataggtgccaggtggaagtgcagtcatgtacg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_006861_LCS count=1; cluster_center=False; cut=143527..143629; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcaagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgccaagtggaaatacagtaatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccaagagatttgaacc
|
|
||||||
>NC_003386_LCS count=1; cluster_center=False; cut=125420..125522; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcaagacgagccg-------------------------------------
|
|
||||||
----------tttattatc---acgataggtgccaagtggaagtgcagtaatgtacg-ca
|
|
||||||
gctgaggcatcctaacagaccgatggctttgaacc
|
|
||||||
>NC_016471_LCS count=1; cluster_center=False; cut=70088..70189; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccaagagatttgaac-
|
|
||||||
>NC_010359_LCS count=1; cluster_center=False; cut=100778..100879; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.923077; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgccaggtggaagtgcagtgatgtatg-ta
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_020372_LCS count=1; cluster_center=False; cut=142338..142439; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.961165; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgatagatttgaac-
|
|
||||||
>NC_014582_LCS count=1; cluster_center=False; cut=127077..127178; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccagtagacttgaac-
|
|
||||||
>NC_024421_LCS count=1; cluster_center=False; cut=132893..132994; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac-
|
|
||||||
>NC_018114_LCS count=1; cluster_center=False; cut=120740..120842; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.952381; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaacc
|
|
||||||
>NC_026847_LCS count=1; cluster_center=False; cut=142523..142622; seq_length=100; cluster=NC_000932_LCS; cluster_score=0.932039; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgcaagacttga---
|
|
||||||
>NC_023120_LCS count=1; cluster_center=False; cut=107871..107972; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.894231; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggtgagactagccg-------------------------------------
|
|
||||||
----------tttacgact---acgataggtgtcaagtggaagtgcagtgatgtatg-ta
|
|
||||||
gctaaggcatcctaacagaccgaaagatttgaac-
|
|
||||||
>NC_014874_LCS count=1; cluster_center=False; cut=41650..41752; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
|
||||||
-aaggtcacggttagacgagccg-------------------------------------
|
|
||||||
----------tttattatt---atgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gctgaggcatactaacagaccgagagattttaacc
|
|
||||||
>NC_011942_LCS count=1; cluster_center=False; cut=39883..39972; seq_length=90; cluster=NC_000932_LCS; cluster_score=0.8; Strand=0; cluster_weight=559;
|
|
||||||
-------------agacgagccg-------------------------------------
|
|
||||||
----------tttatcatc---acgataggtgtcaagtggagatgcagtaatgtatg-ca
|
|
||||||
gctgaggcatcctaaaagaccgagagatttgaac-
|
|
||||||
>NC_016065_LCS count=1; cluster_center=False; cut=58742..58843; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.803738; Strand=0; cluster_weight=559;
|
|
||||||
agaggtcttggcgagactagcca-------------------------------------
|
|
||||||
----------gcgattag----acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gccgagacatcctaagagaccaaaagatttgaac-
|
|
||||||
>NC_022136_LCS count=1; cluster_center=False; cut=152638..152740; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.932039; Strand=1; cluster_weight=559;
|
|
||||||
caaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttctcatc---acgataggtgccaagtggaagtgcagtaatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggaagatttgaac-
|
|
||||||
>NC_014063_LCS count=1; cluster_center=False; cut=89893..89996; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=0; cluster_weight=559;
|
|
||||||
caaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtaatgtatg-ca
|
|
||||||
gctgagtcatcctaacagaccgatagacttgaac-
|
|
||||||
>NC_023121_LCS count=1; cluster_center=False; cut=57558..57654; seq_length=97; cluster=NC_000932_LCS; cluster_score=0.84466; Strand=0; cluster_weight=559;
|
|
||||||
-caggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------ttag--------gtgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gccgaggcatactaaaagaccgaaagatttgaac-
|
|
||||||
>NC_021110_LCS count=1; cluster_center=False; cut=105447..105548; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.87619; Strand=0; cluster_weight=559;
|
|
||||||
cgaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcag----acgataggtgttaagtgaaagtacagtgatgtatg-ca
|
|
||||||
gccaaggcatcctaacagaccga-agatttgaacc
|
|
||||||
>NC_016063_LCS count=1; cluster_center=False; cut=106726..106827; seq_length=102; cluster=NC_000932_LCS; cluster_score=0.885714; Strand=0; cluster_weight=559;
|
|
||||||
cgaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcag----acgataggtgttaagtgaaagtgcagtgatgtatg-ca
|
|
||||||
gccaaggcatcctaacagaccga-agatttgaacc
|
|
||||||
>NC_025642_LCS count=1; cluster_center=False; cut=69137..69239; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagcca-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
gctgagacatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_026202_LCS count=1; cluster_center=False; cut=129378..129480; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttataatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_009266_LCS count=1; cluster_center=False; cut=130502..130604; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgcatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_002202_LCS count=1; cluster_center=False; cut=128763..128865; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagacccacagacttgaac-
|
|
||||||
>NC_025554_LCS count=1; cluster_center=False; cut=135213..135315; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgtagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_021111_LCS count=1; cluster_center=False; cut=32758..32860; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
gctgagacatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_023359_LCS count=1; cluster_center=False; cut=127655..127757; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtgtaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
>NC_010776_LCS count=1; cluster_center=False; cut=136579..136681; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaggtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
>NC_024635_LCS count=1; cluster_center=False; cut=108314..108416; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.980583; Strand=1; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---ataataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_025907_LCS count=1; cluster_center=False; cut=127320..127422; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.951456; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---ccaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccacaagacttgaac-
|
|
||||||
>NC_008336_LCS count=1; cluster_center=False; cut=133098..133200; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.961165; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttattatt---acgataggtgtcaagtggaagtgcagcgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgacagacttgaac-
|
|
||||||
>NC_022457_LCS count=1; cluster_center=False; cut=131133..131235; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.970874; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgccagacttgaac-
|
|
||||||
>NC_023259_LCS count=1; cluster_center=False; cut=137002..137104; seq_length=103; cluster=NC_000932_LCS; cluster_score=0.990291; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttattatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_025909_LCS count=1; cluster_center=False; cut=127251..127354; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.971154; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttctaatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_024038_LCS count=1; cluster_center=False; cut=106484..106587; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.942308; Strand=1; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttctaatt--aacgataggtgtcaggtggaagtgcagtaatgtacg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_014057_LCS count=1; cluster_center=False; cut=42962..43065; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.951923; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttttcatt--aacgataggtgtcaagtggaagtacagtaatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgatagacttgaac-
|
|
||||||
>NC_002694_LCS count=1; cluster_center=False; cut=127517..127620; seq_length=104; cluster=NC_000932_LCS; cluster_score=0.980769; Strand=0; cluster_weight=559;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttttcatt--aacgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac-
|
|
||||||
>NC_010433_LCS_CMP complemented=True; count=19; cluster_center=True; seq_length=103; cluster=NC_010433_LCS; cluster_score=1.0; cluster_weight=28;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac
|
|
||||||
>NC_001666_LCS_CMP complemented=True; count=4; cluster_center=False; seq_length=95; cluster=NC_010433_LCS; cluster_score=0.847619; cluster_weight=28;
|
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
|
||||||
----------ttta----------aataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaac-gaacgaacgatttgaac
|
|
||||||
>NC_013991_LCS_CMP complemented=True; count=2; cluster_center=False; seq_length=103; cluster=NC_010433_LCS; cluster_score=0.961538; cluster_weight=28;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgagagatttgaac
|
|
||||||
>NC_024168_LCS_CMP complemented=True; count=1; cluster_center=False; cut=129161..129258; seq_length=98; cluster=NC_010433_LCS; cluster_score=0.826923; Strand=1; cluster_weight=28;
|
|
||||||
--aggtcacggcaagacgagccg-------------------------------------
|
|
||||||
----------tttt---ag---acaataggtgccaggtggaagcgcagtaatgtgtg-ca
|
|
||||||
gccgaggcatcctaacagaccgagaggtttgaac
|
|
||||||
>NC_023356_LCS_CMP complemented=True; count=1; cluster_center=False; cut=79931..80033; seq_length=103; cluster=NC_010433_LCS; cluster_score=0.961165; Strand=0; cluster_weight=28;
|
|
||||||
taaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---atgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgatagatttgaac
|
|
||||||
>NC_013707_LCS_CMP complemented=True; count=1; cluster_center=False; cut=132910..133011; seq_length=102; cluster=NC_010433_LCS; cluster_score=0.990291; Strand=1; cluster_weight=28;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaa-
|
|
||||||
>NC_021372_LCS count=3; cluster_center=True; seq_length=104; cluster=NC_021372_LCS; cluster_score=1.0; Strand=0; cluster_weight=3;
|
|
||||||
taaggtagcggcgagacgagccg-------------------------------------
|
|
||||||
----------ttt----------aaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacgaac-gaacgatttgaac
|
|
||||||
>NC_007578_LCS count=1; cluster_center=True; cut=129597..129859; seq_length=263; cluster=NC_007578_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
|
||||||
gaaggtcacggcgagacgagccg-------------------------------------
|
|
||||||
----------tttatcatt---acgataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaacc
|
|
||||||
>NC_008454_LCS count=1; cluster_center=True; cut=197495..197626; seq_length=132; cluster=NC_008454_LCS; cluster_score=1.0; Strand=1; cluster_weight=1;
|
|
||||||
gaaggtcacggcgagacgagccg------------------tttatcatattactcaatt
|
|
||||||
gatcattacgtttatcatt---acgataggtgttaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccgttagacttgaac
|
|
||||||
>NC_014569_LCS count=1; cluster_center=True; cut=102326..102478; seq_length=153; cluster=NC_014569_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
|
||||||
gaaggtcacggcgagacgagccgtttgttttagagtgtcaaagtcttgagaattcaggcg
|
|
||||||
cggcccgtcctttagagcaaaacaaataggtgtcaagtggaagtgcagtgatgtatg-ca
|
|
||||||
gctgaggcatcctaacagaccggtagacttgaac
|
|
||||||
>NC_026448_LCS count=1; cluster_center=True; cut=12936..13042; seq_length=107; cluster=NC_026448_LCS; cluster_score=1.0; Strand=0; cluster_weight=1;
|
|
||||||
taaggtcgcggcgagatgatccg-------------------------------------
|
|
||||||
----------ttgatagtgactatgataggtactaagtgtaaatgcagcgatgtatgtta
|
|
||||||
gcttaggtatcctaaaagaccgatttatttgaac
|
|
||||||
|
380
data/rrna/5S.goodali.fst
Normal file
380
data/rrna/5S.goodali.fst
Normal file
@ -0,0 +1,380 @@
|
|||||||
|
>RRNA5S_NC_014573_209 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||||
|
AGTTCTGGTGTCCTATGCCTAGAGGAAACACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGTAGACCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_013086_133 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909091; cluster_center=False;
|
||||||
|
TATTCTGGTGTCTTAGTCGTAGAGGAACCACACCAATCCATCCCGAACTCGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGCAGGGGAAGCCCCG-CGG-GAAAATAGCTCGGCGCCAG
|
||||||
|
GGT
|
||||||
|
>RRNA5S_NC_014348_67 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.902439; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCCAGGCGTAGAGGAACCACACCGATCCATCTCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACCGCGGTAACAATACTGCAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_020146_24 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.917355; cluster_center=False;
|
||||||
|
TATTCTGGTGTCTTAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACAATACTATAGGGGAAGCCCTG-TGG-GAAGATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_004543_174 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.900826; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATTCCGAACTTGGTGGTGAAA
|
||||||
|
CTTTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-TGG-AAAGATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_014675_134 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||||
|
TATTCTGGTGTCTTGGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACCGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_001319_172 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909091; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTATTGCGGTGACAATACTTTAGGGGAAGCCCTA-TGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026212_18 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_025668_171 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_012052_173 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTTTACTGCGGTGACAATACTGTAGGGGAAGCCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_017006_131 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||||
|
TATTCTGGTGTCTCAGGCGTGGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAACTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_008829_38 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.917355; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_003386_48 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||||
|
ATTTCTGGTGTCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_006861_45 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCTCAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCCACTGCGGTGACAATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_020147_170 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.902439; cluster_center=False;
|
||||||
|
--TTCTGGTGTCTCAGGCGTGGGGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CCCTACTGCGGTGACGATACTGTAGGGGGAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026296_10 count=6; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||||
|
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTTTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-TGG-AAAAATAGCTCGATGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_024024_14 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.909836; cluster_center=False;
|
||||||
|
AATTCTGGTGTCTGAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTTTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-TGG-AAAAATAGCTCGATGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_024945_203 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.942623; cluster_center=False;
|
||||||
|
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_020321_204 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||||
|
AATTCTGGTGTCTCAGGCGTAGGGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009765_95 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAAAGGACCCACACCAATCCATCTCGAACTTGGTAGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCTACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009949_96 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAAAGGACCCACACCAATCCATCTCGAACTTGGTAGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCTACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_014589_39 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.910569; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTA-TGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_011156_202 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.918033; cluster_center=False;
|
||||||
|
AATTCTGGTGTCCCAGGCATAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_011158_11 count=5; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||||
|
AATTCTGGTGTCCCAGGCATAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_016064_74 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
GATTCTGGTGTCCAAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_016058_201 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
AATTCTGGTGTCCAAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_021456_33 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||||
|
AATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTATAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_011153_22 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
AATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_011930_30 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
GATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_014575_40 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.933884; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-GAAAATAGCTCGGTGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026778_120 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.934426; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTGAAA
|
||||||
|
CTCTACTGTGGTGACAATACTGTAGGGGGGGCCTTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_014582_126 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAAGGACACCAACCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_022927_119 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGATGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_023119_32 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
GATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTAGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_001568_127 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTATAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
TTATACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026040_89 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATCCTGGTGCCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGCAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_016471_115 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.950413; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGTGGTGACAATACTGTAGGGGGGGCCCCG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_005086_94 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTGGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009600_93 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_021936_125 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAAGCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_025906_128 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTGGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_015083_130 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.958678; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGTCGTAGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024635_16 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAAGCACACCAATCCATACCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_002762_2 count=89; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-CAAAATAGCTCGATGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_025237_124 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-TAAAATAGCTCGATGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_025305_122 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_018112_6 count=20; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-CAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024827_19 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCCAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009266_31 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTTTACTGCGGTGACGATACTGTAGGGGAAGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026779_34 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTTTACTGCGGTGACGATACTGTAGGGGGGGTTCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_009618_35 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTGGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAAGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_016708_116 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTATTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-CAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_014056_114 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTAGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_026772_5 count=22; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_018114_42 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.959016; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_026775_102 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.966942; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_026773_113 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGGGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_024736_20 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGCGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_025642_103 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGCGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026299_21 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026076_99 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_009269_9 count=17; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009273_98 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.916031; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026446_41 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975410; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTGCCGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024064_7 count=17; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGAAGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024732_23 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTGAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009601_29 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTGGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_021449_104 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTAACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026785_105 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGCAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_018552_110 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTA-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024813_117 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTATTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_024421_44 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_026786_4 count=26; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
AAT
|
||||||
|
>RRNA5S_NC_009808_151 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TCTTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026703_168 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
--TTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_009599_43 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983607; cluster_center=False;
|
||||||
|
-ATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGGAAAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_002693_111 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GA-
|
||||||
|
>RRNA5S_NC_004993_1 count=177; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_023260_112 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_015621_36 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.925620; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGA------
|
||||||
|
---
|
||||||
|
>RRNA5S_NC_008407_100 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCA-CCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGATGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_023357_12 count=5; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_008454_121 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_016728_15 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-GAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_023115_123 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAATTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_011163_108 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024038_109 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.975207; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-GAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_020372_92 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026565_27 count=2; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGCCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024166_107 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_022451_106 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGAGAGGTCCTG-CGG-AAAAATAGCTCGACGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024542_17 count=3; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGCCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_026676_101 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTAGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_024035_118 count=1; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.983471; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTTTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
||||||
|
>RRNA5S_NC_021649_3 count=29; cluster_weight=528; cluster=RRNA5S_NC_004993_1; cluster_score=0.991736; cluster_center=False;
|
||||||
|
TATTCTGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAA
|
||||||
|
CTCTACTGCGGTGACGATACTGTAGGGGAGGTCCTG-CGG-AAAAATAGCTCGGCGCCAG
|
||||||
|
GAT
|
18
data/rrna/README
Normal file
18
data/rrna/README
Normal file
@ -0,0 +1,18 @@
|
|||||||
|
Commands used to build the plast_RRNA.hmm
|
||||||
|
|
||||||
|
hmmbuild --dna -n RRNA_23S --wpb plast_RRNA_23S.hmm 23S.goodali.fst
|
||||||
|
hmmbuild --dna -n RRNA_16S --wpb plast_RRNA_16S.hmm 16S.goodali.fst
|
||||||
|
hmmbuild --dna -n RRNA_5S --wpb plast_RRNA_5S.hmm 5S.goodali.fst
|
||||||
|
hmmbuild --dna -n RRNA_4.5S --wpb plast_RRNA_4.5S.hmm 4.5S.goodali.fst
|
||||||
|
|
||||||
|
revcomp 23S.goodali.fst > 23S.goodali.rc.fst
|
||||||
|
revcomp 16S.goodali.fst > 16S.goodali.rc.fst
|
||||||
|
revcomp 5S.goodali.fst > 5S.goodali.rc.fst
|
||||||
|
revcomp 4.5S.goodali.fst > 4.5S.goodali.rc.fst
|
||||||
|
|
||||||
|
hmmbuild --dna -n RRNA_23S_RC --wpb plast_RRNA_23S_RC.hmm 23S.goodali.rc.fst
|
||||||
|
hmmbuild --dna -n RRNA_16S_RC --wpb plast_RRNA_16S_RC.hmm 16S.goodali.rc.fst
|
||||||
|
hmmbuild --dna -n RRNA_5S_RC --wpb plast_RRNA_5S_RC.hmm 5S.goodali.rc.fst
|
||||||
|
hmmbuild --dna -n RRNA_4.5S_RC --wpb plast_RRNA_4.5S_RC.hmm 4.5S.goodali.rc.fst
|
||||||
|
|
||||||
|
cat plast_RRNA_*.hmm > plast_RRNA.hmm
|
BIN
data/rrna/RRNA_16S/.DS_Store
vendored
Normal file
BIN
data/rrna/RRNA_16S/.DS_Store
vendored
Normal file
Binary file not shown.
@ -0,0 +1,3 @@
|
|||||||
|
>RRNA16S_NC_001865_139 count=1; cluster_weight=1; cluster=RRNA16S_NC_001865_139; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TCACTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCTCGAACTAAGAAGTGA
|
||||||
|
AACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGCCTAATGCA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_001865_139.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_001865_139.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_001865_139 count=1; cluster_weight=1; cluster=RRNA16S_NC_001865_139; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tcactaccttgtattcttgcttgcatggaaccaccttatccatctcgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagcctaatgca
|
@ -0,0 +1,3 @@
|
|||||||
|
>RRNA16S_NC_002186_383 count=1; cluster_weight=1; cluster=RRNA16S_NC_002186_383; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ATCCTGGCATCGAGCTATTTTTCCATAGAGCTACCTCTAAAGTATTTTTGCCGCTGCAAT
|
||||||
|
GTTTCACAACCAAGTTCGGGATGGATTGGTGTGGTTCCACTGCGCTAAAGACACCAGGAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_002186_383.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_002186_383.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_002186_383 count=1; cluster_weight=1; cluster=RRNA16S_NC_002186_383; cluster_score=1.000000; cluster_center=True;
|
||||||
|
atcctggcatcgagctatttttccatagagctacctctaaagtatttttgccgctgcaatgtttcacaaccaagttcgggatggattggtgtggttccactgcgctaaagacaccaggat
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_004115_102 count=1; cluster_weight=1; cluster=RRNA16S_NC_004115_102; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GATTCTGGCATCGAGCTATCTTTCCACAGAGCTGCCCCTGAAGTATTGTCACCGCAGTAG
|
||||||
|
AGTTTCACCACCAAGTTCGGGATGGATTGGTGTGGGGCCTCTACGCCTAAGACACCAGAA
|
||||||
|
TA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004115_102.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004115_102.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_004115_102 count=1; cluster_weight=1; cluster=RRNA16S_NC_004115_102; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gattctggcatcgagctatctttccacagagctgcccctgaagtattgtcaccgcagtagagtttcaccaccaagttcgggatggattggtgtggggcctctacgcctaagacaccagaata
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_004677_107 count=1; cluster_weight=1; cluster=RRNA16S_NC_004677_107; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GCTTTTCTCGCATTTATGCCCTTCCTCGTTCATGGTTTGAAATTCTGGTGTCCCAGGCAT
|
||||||
|
AGAGGAACCACACCAACCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATAC
|
||||||
|
TGTAGGGGGAGCCCTGCGGGAAAATAGCTCGGTGCCAGGAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004677_107.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_004677_107.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_004677_107 count=1; cluster_weight=1; cluster=RRNA16S_NC_004677_107; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gcttttctcgcatttatgcccttcctcgttcatggtttgaaattctggtgtcccaggcatagaggaaccacaccaacccatcccgaacttggtggttaaactctactgcggtgacgatactgtagggggagccctgcgggaaaatagctcggtgccaggat
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_008097_328 count=1; cluster_weight=1; cluster=RRNA16S_NC_008097_328; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TGAGCTAATAGCCCATCATTTTGGAAGATTAGGCCCCTTACCTTATTTATTCGTTCTGAA
|
||||||
|
TTATGATTTTGAGAATTGATTCTTAATTCTGAATTTCAGTAGGATATAAGGGCCTAAATC
|
||||||
|
AGTTCTGTATGATCTAGAAAAAACTGCAAATTTGTAGCAGTAACTCATTCTCCCTTAAAA
|
||||||
|
GGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCAC
|
||||||
|
TAGCCCTGCCTTCGGCATCCCCCTCCTTAAATAATTTAAGGTTAGGGTAACGACTTCGGG
|
||||||
|
CATGGTCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCG
|
||||||
|
CCGTATGGCTGACCGGCGATTACTAGCGATTCCGCCTTGATGCAGGCGAGTTGCAGCCTG
|
||||||
|
CAATCCGAACTGAGACCGGGTTTTTGAGGTTAGCTCGCCTTCGCAGGGTTGCAACTCTTT
|
||||||
|
GTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGATGTAAGGGGCATGCTGACTTGACGTC
|
||||||
|
ATCCTCACCTTCCTCCGGATTATCACCGGCAGTCTCTCTAGAGTTCCATAATGGCAACTA
|
||||||
|
GAAACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGA
|
||||||
|
CAGCCATGCACCACCTGTATCCGTGTTCCCGAAGGCACTCCCTCTTTTCAGAGGGACTCA
|
||||||
|
CAGTATGTCAAACCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCAC
|
||||||
|
CGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCGTACTCCCCAGG
|
||||||
|
CGGGACACTTAACGCGTTAGCTCCAGCACTGAACGGATCAAATCGTCCAGCACTTAGTGT
|
||||||
|
CCATCGTTTACAGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGT
|
||||||
|
CTCTCAGTGTCAGTATCGGCCCAGCAGAGTGCTTTCGCCTTGGGCGTTCTTTCCGATATC
|
||||||
|
TACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCTCTACCGGACTCCAGCTTAGTAG
|
||||||
|
TTTCTGCTGCCTGTCTAGGGTTAAGCCCTAGTTTTTAACAGCAGACTGAAAAAGCCACCT
|
||||||
|
ACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCT
|
||||||
|
GCTGGCACAGAGTTAGCCGATGCTTATTCTTCAGATACCGTCATGATTTCGTCTCTGAAA
|
||||||
|
AAAGGAGTTTACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTC
|
||||||
|
GCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTC
|
||||||
|
CCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCGTTGCCTTGGTAAGCGATTAC
|
||||||
|
CTCACCAACTAGCTAATCAGACGCAAGTCTCTCCTAGGGCGGATTCCTCCTTTTACTCCT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008097_328.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008097_328 count=1; cluster_weight=1; cluster=RRNA16S_NC_008097_328; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tgagctaatagcccatcattttggaagattaggccccttaccttatttattcgttctgaattatgattttgagaattgattcttaattctgaatttcagtaggatataagggcctaaatcagttctgtatgatctagaaaaaactgcaaatttgtagcagtaactcattctcccttaaaaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactccagtcactagccctgccttcggcatccccctccttaaataatttaaggttagggtaacgacttcgggcatggtcagctcccatagtgtgacgggcggtgtgtacaaggcccgggaacggattcaccgccgtatggctgaccggcgattactagcgattccgccttgatgcaggcgagttgcagcctgcaatccgaactgagaccgggtttttgaggttagctcgccttcgcagggttgcaactctttgtcccggccattgtagcacgtgtgtcgcccaggatgtaaggggcatgctgacttgacgtcatcctcaccttcctccggattatcaccggcagtctctctagagttccataatggcaactagaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgagctgacgacagccatgcaccacctgtatccgtgttcccgaaggcactccctcttttcagagggactcacagtatgtcaaaccctggtaaggttcttcgcgttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcactcttgcgagcgtactccccaggcgggacacttaacgcgttagctccagcactgaacggatcaaatcgtccagcacttagtgtccatcgtttacagctaggactactggggtatctaatcccattcgctcccctagctttcgtctctcagtgtcagtatcggcccagcagagtgctttcgccttgggcgttctttccgatatctacgcatttcaccgctccaccggaaattccctctgcctctaccggactccagcttagtagtttctgctgcctgtctagggttaagccctagtttttaacagcagactgaaaaagccacctacagacgctttacgcccaatcattccggataacgcttgcatcctctgtcttaccgcggctgctggcacagagttagccgatgcttattcttcagataccgtcatgatttcgtctctgaaaaaaggagtttacgacccgtaggccttctacctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattccccactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcagatcagctactgatcgttgccttggtaagcgattacctcaccaactagctaatcagacgcaagtctctcctagggcggattcctccttttactcct
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_008099_358 count=1; cluster_weight=1; cluster=RRNA16S_NC_008099_358; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAAGGAGGTATTCCAATCCACACCTTCCAGTACGGATACCTTGTTACGACTTCACCATAG
|
||||||
|
TTACTAGTTACACCGTAGGCGCTTTCTTCCAAAAGGTTAGATCCACGACTTCGGGCGGAA
|
||||||
|
CCAACTTCCATGGTGTGACGGGCGGTGTGTACAAGGCTCGGGAACGTATTCACCGCTGTA
|
||||||
|
TTGCTGACCAGCGATTACTAGCAATTCCGGCTTCATACAGGCGAGTTGCAGCCTGCAATC
|
||||||
|
CGAACTAAGACTGGGTTTTTGAGGTTGGCTTCTTCTCGCGAAGTTGCATCCCATTGTCCC
|
||||||
|
AGCCATTGTAGCACGTGTGTAGCCCAAGATGTAAGGGGCATGCTGATTTGACGTCATCCT
|
||||||
|
CACCGTCCTCCGGCTTATCACCGGCAGTCTCGCTAGTTTCCCAAATGGCAACTAGTCGAT
|
||||||
|
AAGGGTTGCGCTCGTTGCAGGACTTAACCTAACACCTCACGGCACGAGCTGACGACAACC
|
||||||
|
ATGCACCACCTGTGTTCACGTTGCTTAATGCCGGACTCAGTCCAGCAGCAAAAGAGTCAC
|
||||||
|
TTTCGCGACTCGGCGTGACATGTCAAACCTTGGTAAGGTTCTTCGCGTATCATCGAATTA
|
||||||
|
AACCACATGCTCCACTGCTTGTGCGAGCCCCCGTCAATTCCTTTGAGTTTCACCCTTGCG
|
||||||
|
AGCATACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAATACTGAATGTTTTGAATCA
|
||||||
|
CCCAATACTTAGTATCCATCGTTTACAGCTAGAACTACTATGGTATCTAATCATATTCGC
|
||||||
|
TACTCTAGCTTTCGTCTCTCAGCGTCAGTTTCGGCCCAGTAGAGTGCTTTCGCCGTTGGT
|
||||||
|
GTTCCTCCCAATCTCTACACATTTCACCGTTACACTGGGAATTCCCTCTACCTCTACCGT
|
||||||
|
ACTCAAGTTTTCTAGTTTCCGCTGCCGACCCAGGGTTAAGCCCTAGTCTTTGACACCAGA
|
||||||
|
CTTGAAAAACCGCCTACAGACTCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCCC
|
||||||
|
CGTATTACCGCGACTGCTGGCACGGAGTTAGTCGATGCTTATTCCTCAAATAATGTCAGT
|
||||||
|
ATTCATCCTTGAGAAAAGAAGTTTACAACCCACGGGCCGTCATCCTTCACGCGGTATTGC
|
||||||
|
TCCGTCAGGCTTTCACCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGG
|
||||||
|
GCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGATCGTCGCCT
|
||||||
|
TGGTAAGCCATTACCTCACCAACTAGCTAATCAGCCGCAAGCCCGTCTTTAGGCCCCTGA
|
||||||
|
AAGGGTTTCACTCCTCAGCATATGGAGTATTAGCAACCGTTTCCAGTTGTTATCCTCCTC
|
||||||
|
CTAAAGGTAGGTTCTTACGTGTTACTCACCCGTCCGGCGCTGGCTAGACTGTACAAGTAC
|
||||||
|
AGTTTCGCTCGCTTGCCTTGCATGTGTTAAGCATACCGCCAGCGTTCATCCTGAGCCAGG
|
||||||
|
ATCAAACTCTCCATGATAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008099_358.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008099_358 count=1; cluster_weight=1; cluster=RRNA16S_NC_008099_358; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaaggaggtattccaatccacaccttccagtacggataccttgttacgacttcaccatagttactagttacaccgtaggcgctttcttccaaaaggttagatccacgacttcgggcggaaccaacttccatggtgtgacgggcggtgtgtacaaggctcgggaacgtattcaccgctgtattgctgaccagcgattactagcaattccggcttcatacaggcgagttgcagcctgcaatccgaactaagactgggtttttgaggttggcttcttctcgcgaagttgcatcccattgtcccagccattgtagcacgtgtgtagcccaagatgtaaggggcatgctgatttgacgtcatcctcaccgtcctccggcttatcaccggcagtctcgctagtttcccaaatggcaactagtcgataagggttgcgctcgttgcaggacttaacctaacacctcacggcacgagctgacgacaaccatgcaccacctgtgttcacgttgcttaatgccggactcagtccagcagcaaaagagtcactttcgcgactcggcgtgacatgtcaaaccttggtaaggttcttcgcgtatcatcgaattaaaccacatgctccactgcttgtgcgagcccccgtcaattcctttgagtttcacccttgcgagcatactccccaggcgggatacttaacgcgttagctacaatactgaatgttttgaatcacccaatacttagtatccatcgtttacagctagaactactatggtatctaatcatattcgctactctagctttcgtctctcagcgtcagtttcggcccagtagagtgctttcgccgttggtgttcctcccaatctctacacatttcaccgttacactgggaattccctctacctctaccgtactcaagttttctagtttccgctgccgacccagggttaagccctagtctttgacaccagacttgaaaaaccgcctacagactctttacgcccaatcattccggataacgcttgcatcccccgtattaccgcgactgctggcacggagttagtcgatgcttattcctcaaataatgtcagtattcatccttgagaaaagaagtttacaacccacgggccgtcatccttcacgcggtattgctccgtcaggctttcacccattgcggaaaattcctcactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcgtcctctcagaccagctactgatcgtcgccttggtaagccattacctcaccaactagctaatcagccgcaagcccgtctttaggcccctgaaagggtttcactcctcagcatatggagtattagcaaccgtttccagttgttatcctcctcctaaaggtaggttcttacgtgttactcacccgtccggcgctggctagactgtacaagtacagtttcgctcgcttgccttgcatgtgttaagcataccgccagcgttcatcctgagccaggatcaaactctccatgatat
|
@ -0,0 +1,3 @@
|
|||||||
|
>RRNA16S_NC_008100_368 count=1; cluster_weight=1; cluster=RRNA16S_NC_008100_368; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AATAAAATTAGTGTCTTAATAATATAGAAAGACCTTAAATCCATACCGAACTAAGAAGTG
|
||||||
|
ATACTATATTAAAACAAAAATACTAAGTGGGCAGCTGCTTGGAAAGATAGTTAGATGCT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008100_368.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008100_368.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008100_368 count=1; cluster_weight=1; cluster=RRNA16S_NC_008100_368; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aataaaattagtgtcttaataatatagaaagaccttaaatccataccgaactaagaagtgatactatattaaaacaaaaatactaagtgggcagctgcttggaaagatagttagatgct
|
@ -0,0 +1,3 @@
|
|||||||
|
>RRNA16S_NC_008101_97 count=1; cluster_weight=1; cluster=RRNA16S_NC_008101_97; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GATATGTTAAAACAAGAAGTTATTAAATATTTTGAAACAATGGATTTATTTAATCCAATT
|
||||||
|
TATATGATGGCTTTTTCTGGAGCTCGAGGAAATATGTCCCAAGTACGTCAATTAGTTGG
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008101_97.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008101_97.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008101_97 count=1; cluster_weight=1; cluster=RRNA16S_NC_008101_97; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gatatgttaaaacaagaagttattaaatattttgaaacaatggatttatttaatccaatttatatgatggctttttctggagctcgaggaaatatgtcccaagtacgtcaattagttgg
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_008114_120 count=1; cluster_weight=1; cluster=RRNA16S_NC_008114_120; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GTTTGTCTAGCCATATCCGACATTATTATACCTAAAAAAAAACGTAAATCAAAGTTTTTT
|
||||||
|
AATAGAAAAACGTTTTATAGAAGCCAAAAAATTCCATTTTTTCCTTAATAATTTTGATTT
|
||||||
|
CGTTTTTGAACTTCTTATAATTTTTTATTTTGTAAAGTTTCCGCTAAAAATTTCTTTTTA
|
||||||
|
AAATTCATAAAAACTTAGCTATAAGTTTCACAGATATTTTTTTTCTTAGTTTAAAATCCA
|
||||||
|
TTAAAAAATTACGATATAATCTAAAATTGACAACTTCAACGCGCTGCTTTTACCGTGTCT
|
||||||
|
TCCCTTTTGAGCAGCTTTGAAGTTTTGCTCCTTGCTTCGCTACTACTCAAAGGGGAATTC
|
||||||
|
TTTTGGAACAAATAAAGCCGAATACAGCAAGGGATAGCAAAAAAAACTGCGGTTTTGAAT
|
||||||
|
TGAATAAAGAAGGAATTAACTTTCGGTATTCAAATCTTTTGTTATAGCTTTTTCTAAATT
|
||||||
|
TAATTTTTTTGACGCTCTACTTGCTATAAAATAGGCTTGGATTGCTTGTTTTAAGGCTTT
|
||||||
|
TTTTTTCCAAACTGTTTTTCTTAAATTTGTTTTTGATTTAGATGTTCGTTTTTTTGGAAC
|
||||||
|
TGCCATTTTCTTTCTCCTTTGTTAAGAACACTTTTTAGACTTATTTTTCATCTTTTTCAT
|
||||||
|
TTTAAAATGAAAGTCGGGCATTCTTTGTGATAGTATTTATATAATAAAAAGAGTGGTTCA
|
||||||
|
ACAATAAAAATGAACCAACTTTTTTATATGAAAAACAATGTTTTCAAATTTGATGGTAAA
|
||||||
|
ATTTTTTTTTAAACTTTTAGATTTTATATCATTAAAAAGGGGAACAAACACTACTTTAAA
|
||||||
|
TGGTTTCCTCTTTTCTTCAATCATTGTGTTTTGCTTCAAAGCCGGGGGAAAAATTTAGGT
|
||||||
|
TTCGATTTTGAAGTACCTTTCAAAAAACGGAGTTAATTTTATTTTTTTTATGAAAAAATC
|
||||||
|
TTATTTTTAAAAACTTTTTTCATAATTTTTTTTATGAAAAAAGTTTCCGTAAGATTTAAA
|
||||||
|
AGTTGTTTTTTTTTATTTCTTCGAATATTATAAATAAATAAAAAAAAATTAGCAAATACT
|
||||||
|
TTTAATCGTTATTAGTTTCTTTTATTTTTTGTTTTGTAAAATCGGTAGTTGTAAAAATTA
|
||||||
|
CAGGCTTTTTTTTAGATTAGGAGTAATATTTTTTTAAAACGAATTAGTAAAAAAAAAAAA
|
||||||
|
CAATACTTTATAATAGGAAAAAACTGTTGCGAACAGGGGGAATCGAACCCCCGACTTCGC
|
||||||
|
CTTGGCAAGGCGACATTTTACCCCTAAACTATGTTCGCTTTTATGGACTTTACTTATTTT
|
||||||
|
AATGAAAGCATAAAACTCTGTCAACTGGAAGTTAATGCACGATTCTTTAAATTAATTTTA
|
||||||
|
GAACGAATTAAACTCTTTTAACATATTATCATATTATTTCGCTCTCTTTTTTTGAAACGA
|
||||||
|
TTCTAGTTTTTAATTTTTTAGTTTCTTATTTTAAAGAAACAAATTTTCTTTTTGACGGAA
|
||||||
|
TAATTTTAAAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008114_120.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008114_120 count=1; cluster_weight=1; cluster=RRNA16S_NC_008114_120; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gtttgtctagccatatccgacattattatacctaaaaaaaaacgtaaatcaaagttttttaatagaaaaacgttttatagaagccaaaaaattccattttttccttaataattttgatttcgtttttgaacttcttataattttttattttgtaaagtttccgctaaaaatttctttttaaaattcataaaaacttagctataagtttcacagatattttttttcttagtttaaaatccattaaaaaattacgatataatctaaaattgacaacttcaacgcgctgcttttaccgtgtcttcccttttgagcagctttgaagttttgctccttgcttcgctactactcaaaggggaattcttttggaacaaataaagccgaatacagcaagggatagcaaaaaaaactgcggttttgaattgaataaagaaggaattaactttcggtattcaaatcttttgttatagctttttctaaatttaatttttttgacgctctacttgctataaaataggcttggattgcttgttttaaggctttttttttccaaactgtttttcttaaatttgtttttgatttagatgttcgtttttttggaactgccattttctttctcctttgttaagaacactttttagacttatttttcatctttttcattttaaaatgaaagtcgggcattctttgtgatagtatttatataataaaaagagtggttcaacaataaaaatgaaccaacttttttatatgaaaaacaatgttttcaaatttgatggtaaaatttttttttaaacttttagattttatatcattaaaaaggggaacaaacactactttaaatggtttcctcttttcttcaatcattgtgttttgcttcaaagccgggggaaaaatttaggtttcgattttgaagtacctttcaaaaaacggagttaattttattttttttatgaaaaaatcttatttttaaaaacttttttcataattttttttatgaaaaaagtttccgtaagatttaaaagttgtttttttttatttcttcgaatattataaataaataaaaaaaaattagcaaatacttttaatcgttattagtttcttttattttttgttttgtaaaatcggtagttgtaaaaattacaggcttttttttagattaggagtaatatttttttaaaacgaattagtaaaaaaaaaaaacaatactttataataggaaaaaactgttgcgaacagggggaatcgaacccccgacttcgccttggcaaggcgacattttacccctaaactatgttcgcttttatggactttacttattttaatgaaagcataaaactctgtcaactggaagttaatgcacgattctttaaattaattttagaacgaattaaactcttttaacatattatcatattatttcgctctctttttttgaaacgattctagtttttaattttttagtttcttattttaaagaaacaaattttctttttgacggaataattttaaat
|
52
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.align.fasta
Normal file
52
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.align.fasta
Normal file
@ -0,0 +1,52 @@
|
|||||||
|
>RRNA16S_NC_008116_114 count=1; cluster_weight=1; cluster=RRNA16S_NC_008116_114; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GTTCAAATAATTAAGGGCTTATGGTGGATACCTAGGCACCCAGAGACGAAGAAGGGCGTA
|
||||||
|
GCAAGCGACGAAATGCTTCGGGAAGCTGAGAACAAGCATTGATCCGGAGATGCCCGAATA
|
||||||
|
GGGGAACCTATTTGACTGCCTGCTGAATTGATAGGGAGGCAAGAGACAACCTGGCGAACT
|
||||||
|
GAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCTGAGTAGTGGCGAGC
|
||||||
|
GAAATGGGAACAGCCTAAACCGGCTTCCGTTTTGGGAGTCGGGGTTGTGGGAGAGCGACA
|
||||||
|
GTTGTTAAGAGTTACTAGACGAAGCAGCTGAGTCCTGCACCTGAGATGGTGAGAGTCCAG
|
||||||
|
TAGTTGAAAGTATCTCTAACAAACGCTAATTCCCGAGTAGCATGGGGCACGTGAAATCCC
|
||||||
|
GTGTGAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGTGAAG
|
||||||
|
TAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAAC
|
||||||
|
CGTAAGCCTCCAAGCAGTGGGAGGAGAATGGAATCTCTGACCGCGTGCCTGTTGAAGAAT
|
||||||
|
GAGCCGGCGACTTATAGGCAGTGGCCTGGTTAAGGCGTGAAGCCGGAGCCGTAGCGAAAG
|
||||||
|
CGAGTCTTTCTAGGGCGAATGTCACTGCTTATGGACCCGAACCCGGGTGATCTAACCATG
|
||||||
|
GCCAGGGTGAAGCTTGGGTGAAGCCAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATC
|
||||||
|
AGCGGATGAGCTGTGGTTAGGGGTGAAATGCCACTCGAACTCGGAGCTAGCTGGTTCTCC
|
||||||
|
CCGAAATGCGTTGAGGCGCAGCGGTTGACTGGACTGCCTAGGGGTAAAGCACTGTTTCGG
|
||||||
|
TGCGGGCTGCGAAAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGGCACGACATCGG
|
||||||
|
TCAGCCAGTAAGACGGTGGGGGATAAGCTTCATCGTCAAGAGGGAAACAGCCCAGACCAC
|
||||||
|
CAGCTAAGGCCCCTAAATGACCGCTCAGTGGCAAAGGAGGTGAGAGTGCAAAGACAGCCA
|
||||||
|
GGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCG
|
||||||
|
CTCTTGCGCCGAAGATGAACGGGACTAAGCGGTCTGCCGAAGCTGTGGGATGTCCATTAG
|
||||||
|
GGCATCGGTAGGGGAGCGTTCCGCAAACGGGAGAAGCATCAGTGTAAACAGGTGTGGACG
|
||||||
|
AAGCGGAAGTGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCG
|
||||||
|
AAAACCCAAGGGTTCCTCCGCAAGGCTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCA
|
||||||
|
TGCCGAACGGCGCAGTCGATGGACAACAGGTCAAGATTCCTGTACTACCCCTTGTCGGCA
|
||||||
|
ATAAGAGGGACGGAGGAGGCTAAGCTAGCCGAATAATGGTCATCGGTTCAAGGGCCTGAA
|
||||||
|
AACCTGAGTACTAGGCACCTACGGGGCCGAAGTAGCTGATGCCACGCTCCCAAGAAAAGC
|
||||||
|
TCTTACGCCAATACTGACACGAAGTGTGTCTGAAAAAGCAAAGATTTGATTTCCTTTAAA
|
||||||
|
AGAAAAAAATCGTTGTTTTTTCAACAAAACAAAAATAAGACAAGTGCCCGAAAGGGTCCC
|
||||||
|
ATATATATGGGAGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTTGAGAATACCTA
|
||||||
|
GGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAGATGGCCCCGTAACTTCGGGAGAA
|
||||||
|
GGGGTGCCCCTCTGGGGCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGG
|
||||||
|
TCTCCGCAAAGTCGCAAGACGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTA
|
||||||
|
AGGAAGTCGGTGACTCGATACGAGGAAGCTGGCGACCGAAGCCCCGGTGAACGGCGGCCG
|
||||||
|
TAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAA
|
||||||
|
AGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACTTGTCTGTGA
|
||||||
|
AGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGGGA
|
||||||
|
TGGGGTTTGGGCCCTTCTTGCGCAGTCTAGGTGGGAGGCGAAGACGGCGTCCTTCCGGGG
|
||||||
|
ACGCTCGAGCCGAAGATGAGAGACCACCCTAGAAGGGCTAGGATTCTAACCTTATGCCTA
|
||||||
|
GAAGAAGGCTAGGGGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAG
|
||||||
|
GGTAACGGAGGCGTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTTCGAGTGCAAA
|
||||||
|
GGCAGAAGGGAGCTTGACTGCAAGACCTACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG
|
||||||
|
TGATCCGACGGTTCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGAT
|
||||||
|
AACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGG
|
||||||
|
CTCTTCGCCACCTGGCGCGGTAGTACGTGCCAAGGGTTGGGCTGTTCGCCCATTAAAGCG
|
||||||
|
GTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTTGGTCCATATCCGGTGCAGGCGTT
|
||||||
|
AGAGCATTGAGAGGATCTCTCCCTAGTACGAGAGGACCGGGAGGGACGCACCGCTGGTGT
|
||||||
|
GCCAGTTATCGTGCCAACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGA
|
||||||
|
AAGCATCTAAGTAGGAAGCCCACCTCAAGATGAGTGCTCTCCCCACGTACATACCCTATT
|
||||||
|
ATGGGAGTACGGAACGGGAAATCAATCCCGTCAAATGAGGTCACGGCAAGACCAGCCGTT
|
||||||
|
TGTTACAATAGGTGCCAGGTAGAAGTCCCGTAAGGGATGTAGCTGAGGCATCCTAACAGA
|
||||||
|
CCGAGAGATTTGAAC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008116_114.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008116_114 count=1; cluster_weight=1; cluster=RRNA16S_NC_008116_114; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gttcaaataattaagggcttatggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccggcttccgttttgggagtcggggttgtgggagagcgacagttgttaagagttactagacgaagcagctgagtcctgcacctgagatggtgagagtccagtagttgaaagtatctctaacaaacgctaattcccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtaagcctccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggcgtgaagccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggcacgacatcggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactaccccttgtcggcaataagagggacggaggaggctaagctagccgaataatggtcatcggttcaagggcctgaaaacctgagtactaggcacctacggggccgaagtagctgatgccacgctcccaagaaaagctcttacgccaatactgacacgaagtgtgtctgaaaaagcaaagatttgatttcctttaaaagaaaaaaatcgttgttttttcaacaaaacaaaaataagacaagtgcccgaaagggtcccatatatatgggaggtacctgtacccgaaaccgacacaggtgggtaggttgagaatacctaggggcgcgagacaactctctctaaggaactcggcaagatggccccgtaacttcgggagaaggggtgcccctctggggccgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgcaagacgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagtcggtgactcgatacgaggaagctggcgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggatggggtttgggcccttcttgcgcagtctaggtgggaggcgaagacggcgtccttccggggacgctcgagccgaagatgagagaccaccctagaagggctaggattctaaccttatgcctagaagaaggctaggggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggagcttgactgcaagacctacccgtcgagcagggacgaaagtcggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggcgcggtagtacgtgccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagtttggtccatatccggtgcaggcgttagagcattgagaggatctctccctagtacgagaggaccgggagggacgcaccgctggtgtgccagttatcgtgccaacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtaggaagcccacctcaagatgagtgctctccccacgtacataccctattatgggagtacggaacgggaaatcaatcccgtcaaatgaggtcacggcaagaccagccgtttgttacaataggtgccaggtagaagtcccgtaagggatgtagctgaggcatcctaacagaccgagagatttgaac
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_008117_369 count=1; cluster_weight=1; cluster=RRNA16S_NC_008117_369; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AATGCTGGTACCTTAAGCGCAGAGGCAACACGCTAACCCATCCCGAACTTGGCGGTGAAA
|
||||||
|
CTCTGCTGCAGTGACAATACTGCAGGAGAAGTCCTGTGGGAAGATAGCTCGGCGCCAGCT
|
||||||
|
TA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008117_369.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008117_369.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008117_369 count=1; cluster_weight=1; cluster=RRNA16S_NC_008117_369; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aatgctggtaccttaagcgcagaggcaacacgctaacccatcccgaacttggcggtgaaactctgctgcagtgacaatactgcaggagaagtcctgtgggaagatagctcggcgccagctta
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_008155_67 count=1; cluster_weight=1; cluster=RRNA16S_NC_008155_67; cluster_score=1.000000; cluster_center=True;
|
||||||
|
CGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGT
|
||||||
|
TCAATGTGCTCATCAGCGCCTGACCCGAAGATGTGGATCATCCAAGGCACATTAGCATGG
|
||||||
|
CGTACTCCTCCTGTTTGAATCGGAGTTTGAAACCAAACAAACTTCTCCTCAGGAGGATAG
|
||||||
|
ATGGGGCGATTCAGGTGAGATCCCATGTAGATCTAACTTTCTATTCACTCGTGGGATCCG
|
||||||
|
GGCGGTCCGGGGGGGGCACTACGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCA
|
||||||
|
GTGTATGGAGAGCTATCTCTCGAGCACAGGTTGAGGTTCGTCCTCAATGGGAAAATGGAG
|
||||||
|
CACCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCACCCTTTCATTCTGGGGTG
|
||||||
|
ACGGAGGGATCGTACCATTCGAGCCTTTTTTTCATGCTTTTCCCGGCGGTCTGGAGAAAG
|
||||||
|
CAGCAATCAATAGGACTTCCCTAATCCTCCCTTCCTGAAAGGAAGAACGTGAAATTCTTT
|
||||||
|
TTCCTTTCCGCAGGGACCAGGAGGTTGGATCTAGCCATAAGAGGAATGCTTGGTATAAAT
|
||||||
|
AAGCCACTTCTTGGTCTTCGACTCCCTAAGTCACTACGAGCGCCCTCGATCAGTGCAATG
|
||||||
|
GGATGTGGCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGAGCAGGTTTGAAAAAGG
|
||||||
|
ATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTCTCTTAACGCCTTCCTTTTTCTGCCCA
|
||||||
|
TCGGAGTTATTTCCCAAGGACTTGCCATGGTAAGGGGGAGAAGGGGAAGAAGCACACTTG
|
||||||
|
AAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAA
|
||||||
|
AAGGAGTCTATTGATTCTCTCCCAATTGGTTGGATCGTAGGGGCGATGATTTACTTCACG
|
||||||
|
GGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAGGGAAAAGAATAGAAGA
|
||||||
|
AGCATCTGACTCTTTCATGCATACTCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAG
|
||||||
|
AGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGCTGTCTAATTGTCCAGGCG
|
||||||
|
GTAATGGTAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAG
|
||||||
|
GACTGAAACATGCCACTGAAAGACTCTACTGAGACAAAAAGATGGGCTGTCAAAAAGGTA
|
||||||
|
GAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGATAGTTGG
|
||||||
|
AGTCGGCGGCTCTCCTAGGCTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGG
|
||||||
|
CCCTTGCGAATAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGTGGCAAAA
|
||||||
|
GGAAGGAAAATCCATGGACCGACCCCATTATCTCCACCCCGTAGGAACTAC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008155_67.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008155_67 count=1; cluster_weight=1; cluster=RRNA16S_NC_008155_67; cluster_score=1.000000; cluster_center=True;
|
||||||
|
cgcccctgataattgcgtcgttgtgcctgggctgtgagggctctcagccacatggatagttcaatgtgctcatcagcgcctgacccgaagatgtggatcatccaaggcacattagcatggcgtactcctcctgtttgaatcggagtttgaaaccaaacaaacttctcctcaggaggatagatggggcgattcaggtgagatcccatgtagatctaactttctattcactcgtgggatccgggcggtccggggggggcactacggctcctctcttctcgagaatccatacatcccttatcagtgtatggagagctatctctcgagcacaggttgaggttcgtcctcaatgggaaaatggagcacctaacaacgcatcttcacagaccaagaactacgagatcaccctttcattctggggtgacggagggatcgtaccattcgagcctttttttcatgcttttcccggcggtctggagaaagcagcaatcaataggacttccctaatcctcccttcctgaaaggaagaacgtgaaattctttttcctttccgcagggaccaggaggttggatctagccataagaggaatgcttggtataaataagccacttcttggtcttcgactccctaagtcactacgagcgccctcgatcagtgcaatgggatgtggctatttatctatctcttgactcgaaatgggagcagagcaggtttgaaaaaggatcttagagtgtctagggttgggccaggagggtctcttaacgccttcctttttctgcccatcggagttatttcccaaggacttgccatggtaagggggagaaggggaagaagcacacttgaagagcgcagtacaacggagagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggagtctattgattctctcccaattggttggatcgtaggggcgatgatttacttcacgggcgaggtctctggttcaagtccaggatggcccagctgcgccagggaaaagaatagaagaagcatctgactctttcatgcatactccacttggctcggggggatatagctcagttggtagagctccgctcttgcaattgggtcgttgcgattacgggttggctgtctaattgtccaggcggtaatggtagtatcttgtacctgaaccggtggctcactttttctaagtaatggggaagaggactgaaacatgccactgaaagactctactgagacaaaaagatgggctgtcaaaaaggtagaggaggtaggatgggcagttggtcagatctagtatggatcgtacatggacgatagttggagtcggcggctctcctaggcttccctcatctgggatccctggggaagaggatcaagttggcccttgcgaatagcttgatgcactatctcccttcaaccctttgagcgaaatgtggcaaaaggaaggaaaatccatggaccgaccccattatctccaccccgtaggaactac
|
3692
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.align.fasta
Normal file
3692
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008372_414.fasta
Normal file
File diff suppressed because one or more lines are too long
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008454_329 count=1; cluster_weight=1; cluster=RRNA16S_NC_008454_329; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TGGAAACTACCAAGCTGGAGTACGGTAGGGGGAAAG
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008454_329.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008454_329.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008454_329 count=1; cluster_weight=1; cluster=RRNA16S_NC_008454_329; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tggaaactaccaagctggagtacggtagggggaaag
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_008822_98 count=1; cluster_weight=1; cluster=RRNA16S_NC_008822_98; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GATCCTGGCATCGAGCTATTTTCCCGTAGAGTGGCCTCTAGAGTATCTTCACCGCTACAC
|
||||||
|
TGTTTCACTACCAAGTTCGGGATGGATTGGTGTGGTTCCACTGCGCCTAAGACACCAGGA
|
||||||
|
TA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008822_98.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_008822_98.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_008822_98 count=1; cluster_weight=1; cluster=RRNA16S_NC_008822_98; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gatcctggcatcgagctattttcccgtagagtggcctctagagtatcttcaccgctacactgtttcactaccaagttcgggatggattggtgtggttccactgcgcctaagacaccaggata
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_009681_350 count=1; cluster_weight=1; cluster=RRNA16S_NC_009681_350; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTTCTGGTGTGTTTACTGAAATAGAAACACCTCATACCATCCCGACCTGATCGGTGAAA
|
||||||
|
CATTTCAGCGGCTATGATACTGCAAGCGGGGGCTTGTGGGAAAGCAGCCGCATGCCAGAA
|
||||||
|
T
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_009681_350.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_009681_350.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_009681_350 count=1; cluster_weight=1; cluster=RRNA16S_NC_009681_350; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ttttctggtgtgtttactgaaatagaaacacctcataccatcccgacctgatcggtgaaacatttcagcggctatgatactgcaagcgggggcttgtgggaaagcagccgcatgccagaat
|
2722
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.align.fasta
Normal file
2722
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_011031_365.fasta
Normal file
File diff suppressed because one or more lines are too long
51
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.align.fasta
Normal file
51
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.align.fasta
Normal file
@ -0,0 +1,51 @@
|
|||||||
|
>RRNA16S_NC_012097_111 count=1; cluster_weight=1; cluster=RRNA16S_NC_012097_111; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GGTCAAATGATTAAGGGCATACGGCGGATACCTAGGCACCTAGAGACGATGAAAGGCGCA
|
||||||
|
GTACCCGGCGATACGCCTTGGGGAGCCGGACACAGGCCATGATCCAAGGATTCCTGAATG
|
||||||
|
GGACAACCCAAGTACTTCTCATTGAATTCATAGATGAGAAAGAGATAACCTAGTGAATTG
|
||||||
|
AAACATCTTAGTAGCTAGAGGAAAAGAGAGCAAACGCGATTTCCTGAGTAGCGGCGAGCG
|
||||||
|
AAACGGAACGAGCCTAAACCAAAACTATGTTTTGGGGTTGTGGGACAGAAACTAATATTA
|
||||||
|
TAGTTTGACTTTGTTAGATGAAGCGATTGAATGTCGCGCCATAGATGGTGAAAGCCCAGT
|
||||||
|
AATCAAAAACAAAACTCTATAACTTCTGATCCCGAGTAGCATGGGGCACGTGAAATCCCG
|
||||||
|
TGTGAATCCGCGAGGACCACCTCGTAAGGCTAAATACTCCTAGGTGACCGATAGCGAATA
|
||||||
|
GTACCGCGAGGGAACGGTGAAAGAGTACCCTAATCAGGGAGTGAAATAGAACATGAAACC
|
||||||
|
GTATGCTTACAAGCAGTAGGAGGCATCATTTAAAATGCTAACTGCGTTCCTGTTGAAGAA
|
||||||
|
TGAGCCGGCGACTTATGGTCAGTGGCAAGGTTAAAACGAATAGTTGGAGCCAAAGCGAAA
|
||||||
|
GCGAGTCTGAAAGGGCGTCTGTCATTGGCTATAGACCCGAACCCGGGTGATCTAACCGCG
|
||||||
|
GTCAGGATGAAACTTGGGTAAGACTAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATC
|
||||||
|
GGCGGATGAACTGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCC
|
||||||
|
CCGAAATGCGTTGAGGCGCAGCGGTTGATGATTAGGCTGTCTAGGGGTAGAGCACTGTCT
|
||||||
|
CGGTGCGGGCTGCGAGAGCGGTACCAAATCGTAGCAAACTCCGAATACTAGAACAGAGCC
|
||||||
|
ATCAGCCAGTGAGACTGTGGGGGATAAGCTCCATTGTCGAGAGGGAAACAGCCCAGACCA
|
||||||
|
TCGGCTAAGGCCCCTAAATGATTACTAAGTGATAAAGGAGGTGAGAGTGCCCAGACAACC
|
||||||
|
AGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGGTCAAGC
|
||||||
|
GCTCTTGCGCCGAAAATGAACGGGACTAAGTAATCTGCCGAAGCTGTGGGATAACAATTT
|
||||||
|
GTTATCGGTAGGGGAGCGTTCCGAAAAGGGCGAAGTTTAGGCGTGAGCCTTGATGGACTT
|
||||||
|
TTCGGAAGTGAGAATGTCGGCTTGAGTAACGAAAACAGGGGTGATGAATCCCCTGCCCCG
|
||||||
|
AAAGCCCAAGGGTTCCTCCACTAGGCTCGTCCAGGGAGGGTCAGTCAGGACCTAAGACGA
|
||||||
|
GGCCAAACGGCGCAGTCGATGGAAAACAGGCGAACATTCCTGTACTACGTTCCATAATCT
|
||||||
|
GAAACAATTTTTGTTGAAGCACGTACCGGAGGACGGAGAGGGTTATGTTAAACGGTGGGC
|
||||||
|
ACGTTCTCTAACTCGCAGTGATTACAGAGAGGAAAAGAAAACTCTTTGAGCGAAGAGATT
|
||||||
|
AGGGCTTTACTTTTTACTTGTTATTTCAAAATAACATTGTGCCACCAATGATAAAAAGTA
|
||||||
|
AAGATTAACAGATACCGAGATCCCGAGAAAAGTCCGTACTATGTGAAATGAAGAACGTAC
|
||||||
|
CTGTACCCCAAACCGACACAGGTGGGCAAGTAGAGAATACTAAGGGGCGCGAGATAACTC
|
||||||
|
TCTCTAAGGAACTCGGCAAAATGGCCCCGTAACTTCGGGAGAAGGGGTGCCGGATTATAT
|
||||||
|
CCGGCCGCAGCGACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCTAAATC
|
||||||
|
GAAAGATGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAAGCTGGTTA
|
||||||
|
GGATTACCGAAGCTAGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCT
|
||||||
|
AAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATTTGG
|
||||||
|
GCACTGTCTCGGAGAGAGGCTCGGTGAAATAGAATTGTCTGTGAAGATGCGGACTACCTG
|
||||||
|
CACTTGGACAGAAAGACCCTATGAAGCTTTACTGTAGCTTGAGATTGGGCTCGGGCTTTT
|
||||||
|
CTTGCGCAGCTTAGGTGGGAGGCTTAGATCCTATTCTTTTGGGAATAGAGGAGCCGTCAG
|
||||||
|
TGAGATACCACTCTAGGAAGGCTAGAGTCCTAAGGGTGCTCCCTTTGCGGGACACCTAAC
|
||||||
|
AGTCTCAGGTAGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGTGCA
|
||||||
|
AAGGTTCCCTCAGGCTGGACGGAAATCAGTCGTAGAGTATAAAGGCAGAAGGGAGCTTGA
|
||||||
|
CTGCGAGACTGACACGTCAAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTTCCGT
|
||||||
|
GTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTCCCC
|
||||||
|
CAAGAGTTCACATCGACGGGGAGGTTTGGCACCTCGATGTCGGCTCATCGCAGCCTGGGG
|
||||||
|
CGGTAGTGCGTCCCAAGGGTTGGGCTGTTCGCCCATGAAAGCGGTACGTGAGCTGGGTTC
|
||||||
|
AGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGCTAGAGCATTGAGAGGATC
|
||||||
|
CCCCCCTAGTACGAGAGGACCGGGGGGTATGCACCGCTGGTGTACCAGTTCTTTCCCTAC
|
||||||
|
GATCTGTAGGTAAGGATACGCTGGGTAGCTATGTGTGGAGTGGATAACTGCTGAAGGCAT
|
||||||
|
CTAAGTAGGAAGCCCACCTCAAGATGAGTGCTCTTTGAGGCCACGGCAAGACTAGCCGGT
|
||||||
|
AATAAGGATTTTCAGTTATGAAATCTTTCCAGGCTCTAAGTGGAAGCTTTGTAAAAAGTG
|
||||||
|
CAGCTGAGGAGTTCTGATAGGCCAAAAGTTTGACCAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012097_111.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_012097_111 count=1; cluster_weight=1; cluster=RRNA16S_NC_012097_111; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ggtcaaatgattaagggcatacggcggatacctaggcacctagagacgatgaaaggcgcagtacccggcgatacgccttggggagccggacacaggccatgatccaaggattcctgaatgggacaacccaagtacttctcattgaattcatagatgagaaagagataacctagtgaattgaaacatcttagtagctagaggaaaagagagcaaacgcgatttcctgagtagcggcgagcgaaacggaacgagcctaaaccaaaactatgttttggggttgtgggacagaaactaatattatagtttgactttgttagatgaagcgattgaatgtcgcgccatagatggtgaaagcccagtaatcaaaaacaaaactctataacttctgatcccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggctaaatactcctaggtgaccgatagcgaatagtaccgcgagggaacggtgaaagagtaccctaatcagggagtgaaatagaacatgaaaccgtatgcttacaagcagtaggaggcatcatttaaaatgctaactgcgttcctgttgaagaatgagccggcgacttatggtcagtggcaaggttaaaacgaatagttggagccaaagcgaaagcgagtctgaaagggcgtctgtcattggctatagacccgaacccgggtgatctaaccgcggtcaggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactagaacagagccatcagccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcggctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcggtaggggagcgttccgaaaagggcgaagtttaggcgtgagccttgatggacttttcggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaaagcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgaggccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactacgttccataatctgaaacaatttttgttgaagcacgtaccggaggacggagagggttatgttaaacggtgggcacgttctctaactcgcagtgattacagagaggaaaagaaaactctttgagcgaagagattagggctttactttttacttgttatttcaaaataacattgtgccaccaatgataaaaagtaaagattaacagataccgagatcccgagaaaagtccgtactatgtgaaatgaagaacgtacctgtaccccaaaccgacacaggtgggcaagtagagaatactaaggggcgcgagataactctctctaaggaactcggcaaaatggccccgtaacttcgggagaaggggtgccggattatatccggccgcagcgaccaggcccaagcgactgtttaccaaaaacacaggtctccgctaaatcgaaagatgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagctggttaggattaccgaagctagcgactgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatttgggcactgtctcggagagaggctcggtgaaatagaattgtctgtgaagatgcggactacctgcacttggacagaaagaccctatgaagctttactgtagcttgagattgggctcgggcttttcttgcgcagcttaggtgggaggcttagatcctattcttttgggaatagaggagccgtcagtgagataccactctaggaaggctagagtcctaagggtgctccctttgcgggacacctaacagtctcaggtaggcagtttgactggggcggtcgcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagtcgtagagtataaaggcagaagggagcttgactgcgagactgacacgtcaagcaggggcgaaagccggccttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatctcccccaagagttcacatcgacggggaggtttggcacctcgatgtcggctcatcgcagcctggggcggtagtgcgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgctagagcattgagaggatccccccctagtacgagaggaccggggggtatgcaccgctggtgtaccagttctttccctacgatctgtaggtaaggatacgctgggtagctatgtgtggagtggataactgctgaaggcatctaagtaggaagcccacctcaagatgagtgctctttgaggccacggcaagactagccggtaataaggattttcagttatgaaatctttccaggctctaagtggaagctttgtaaaaagtgcagctgaggagttctgataggccaaaagtttgaccat
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_012099_94 count=1; cluster_weight=1; cluster=RRNA16S_NC_012099_94; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GAGGGGATGTTCGCTATATTACAAACCCTACTTTAAGTCCTTTTGTAATCTTTGGTTACA
|
||||||
|
TCCTAAAATCTCCATTTGGTGGAGACGGTTGGATTCCTAGTGTTGATAACATGGAAGATG
|
||||||
|
TTATTGGTGGACATATTTGGATTGGTAGTATTGAAATTTTTGGTGGTATTTGGCACATTC
|
||||||
|
TAACAAAGCCTTTTGCTTGGGCAAGACGTGCTTTTGTATGGTCAGGTGAAGCTTATCTTT
|
||||||
|
CATACAGTCTTGCAGCTGTTTCTTTAATGGCTTTAATTGCTGTACCTATGGTTTGGTTCA
|
||||||
|
ATAATACTGTTTACCCTAGTGAATTCTTTGGTCCTACAGGTCCTGAAGCATCACAGTCAC
|
||||||
|
AAGCTTTTACATTCCTTGTTCGTGACCAACGACTAGGTGCAAATGTTGCATCAGCTCAAG
|
||||||
|
GTCCTACAGGTTTAGGTAAATACCTAATGCGTTCTCCTACAGGAGAAATTATTTTTGGTG
|
||||||
|
GTGAAACAATGCGTTTTTGGGATTTTAGAGGTCCTTGGCTAGAGCCACTTCGTGGTCCTA
|
||||||
|
ATGGTCTTGATCTTAATAAGCTTAAAAATGATATTCAACCTTGGCAAGAACGTCGTTCTG
|
||||||
|
CTGAGTACATGACTCATGCACCTCTAGGTTCACTGAACTCGGTAGGTGGAGTTGCTACAG
|
||||||
|
AAATTAACGCAGTTAACTATGTAAACCCACGTAGTTGGTTAGCAACGTCTCATTTTGTTC
|
||||||
|
TAGGTTTCTTCTTTTTTATTGGCCACTTATGGCATGCAGGTCGTGCACGTGCTGCTGCTG
|
||||||
|
CTGGTTTTGAAAAAGGTATTGATCGTGATAATGAAGCGGTTCTTTCTATGCGTCCACTTG
|
||||||
|
ACTAATAGTTTGGCTAACATTCAGATTATTTAAAAATATTAGTTTTACAAAACTTTCTCT
|
||||||
|
TCTTTTTTAGAAATAAAAGAAGAGAAAGTTTTTATTACATTTTAATTGAATTTACTTGAA
|
||||||
|
AACGTGCTCTTGCGCGTTTAAAAGCAATATTAGCTTCAATTTTTTCTTTTCGACCATTAG
|
||||||
|
CTTTTTCAAGAATTTCTTTCGCAGATTGATATTCAATTTCTGCTTCTTCTGGATTAATAC
|
||||||
|
TTGAACCTAAAACAGCCTCATTAACAAGAATAGTGACTTTGTTATCTTTTACAAGAGCAA
|
||||||
|
AACCACCCATAAGTGCCATCGAAATCCATTCTGTTCCAGTTCGAACAAGCATTACACCAA
|
||||||
|
CATCTAGTCCTGTAATAAGTGGAGTGTGATTTTTTAATACACCCATTTGCCCAGTATTCG
|
||||||
|
TTGGTAAAATAAGCTCTGTAGCTTCTTCGTTCCAAAAAATACGATCCGGGGCCATAATAC
|
||||||
|
AAACTTGTAAACTCATCTTTTTTACTCCTTTTTCTTTACTTCAACTATTTATGATGCTAA
|
||||||
|
AGAAGCACCTTTTTCGATAGCCTCATCTAGATTACCTACTAAATAGAAAGATTGCTCAGG
|
||||||
|
AAGAGCATCTAACTGACCTGTAAGAATCATTTGGAAACCTTGAATGCTTTCTGCTAGAC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012099_94.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_012099_94 count=1; cluster_weight=1; cluster=RRNA16S_NC_012099_94; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gaggggatgttcgctatattacaaaccctactttaagtccttttgtaatctttggttacatcctaaaatctccatttggtggagacggttggattcctagtgttgataacatggaagatgttattggtggacatatttggattggtagtattgaaatttttggtggtatttggcacattctaacaaagccttttgcttgggcaagacgtgcttttgtatggtcaggtgaagcttatctttcatacagtcttgcagctgtttctttaatggctttaattgctgtacctatggtttggttcaataatactgtttaccctagtgaattctttggtcctacaggtcctgaagcatcacagtcacaagcttttacattccttgttcgtgaccaacgactaggtgcaaatgttgcatcagctcaaggtcctacaggtttaggtaaatacctaatgcgttctcctacaggagaaattatttttggtggtgaaacaatgcgtttttgggattttagaggtccttggctagagccacttcgtggtcctaatggtcttgatcttaataagcttaaaaatgatattcaaccttggcaagaacgtcgttctgctgagtacatgactcatgcacctctaggttcactgaactcggtaggtggagttgctacagaaattaacgcagttaactatgtaaacccacgtagttggttagcaacgtctcattttgttctaggtttcttcttttttattggccacttatggcatgcaggtcgtgcacgtgctgctgctgctggttttgaaaaaggtattgatcgtgataatgaagcggttctttctatgcgtccacttgactaatagtttggctaacattcagattatttaaaaatattagttttacaaaactttctcttcttttttagaaataaaagaagagaaagtttttattacattttaattgaatttacttgaaaacgtgctcttgcgcgtttaaaagcaatattagcttcaattttttcttttcgaccattagctttttcaagaatttctttcgcagattgatattcaatttctgcttcttctggattaatacttgaacctaaaacagcctcattaacaagaatagtgactttgttatcttttacaagagcaaaaccacccataagtgccatcgaaatccattctgttccagttcgaacaagcattacaccaacatctagtcctgtaataagtggagtgtgattttttaatacacccatttgcccagtattcgttggtaaaataagctctgtagcttcttcgttccaaaaaatacgatccggggccataatacaaacttgtaaactcatcttttttactcctttttctttacttcaactatttatgatgctaaagaagcacctttttcgatagcctcatctagattacctactaaatagaaagattgctcaggaagagcatctaactgacctgtaagaatcatttggaaaccttgaatgctttctgctagac
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_012101_388 count=1; cluster_weight=1; cluster=RRNA16S_NC_012101_388; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ATCGATTAATTCAACTTGCTTTACCACGTATTCGAGATTTTCAAGGTTTAAGCCAACAAA
|
||||||
|
GTTTTGATGGTCATGGAAACTATACCTTAGGTTTAAAAGAACAATTAATGTTCCCAGAAA
|
||||||
|
TTGATTACGACAAAATCGAAAAATCTCGAGGGATGGATATTTCAATCGTTACTTCAGCCA
|
||||||
|
AAAATGATCAAGATGCTTTTTTGCTCTTAAAAGCATTAGGAATGCCATTTAAAGCTGCTT
|
||||||
|
AAAATTAACTTCTTTTATTTCTTTAAAATTAAAATTTCTTTTACTGTAATTACAAGTTGA
|
||||||
|
AATATTAAATTTGTTCTTTTGCCGTTTTCGGAGGAAAGAAGTTCTCCCTTTTGCAACTCA
|
||||||
|
TCGGCTTGAATGTTTTTGTAAAGAGAATAGAAATGAAGTTTACTTTGTTGCTCTTTCTAA
|
||||||
|
GCAAACTGTATACCCTTCTCTCTGGAGGACCAAAGGGCCAAAGGCCTCCCCCTTCGGGGG
|
||||||
|
AGGAACGGAGTTCTTCCCACGCGATCCTCCCCCCATTTGCGGGGAGGCCTTCGGCCCTCA
|
||||||
|
AGGGGAAACCCAGCTCGTCCCCCTTCCACTTTGACCTGGTGTGCTTCAGCGCTTTGACCT
|
||||||
|
GGTGTGCTTCAGAGCTTTGACCTTTCAGGCCATAAATAAAAGCTCACCCCTTTGAGACCT
|
||||||
|
TTGGTCCTACGGTCCTTTCAAGTAATAAATAAAGCTCAAGCACACCAGGTCAAAGCGCGC
|
||||||
|
AAATGAACAAGGTCCTCAAAAGTAAAAACTATCCAGAGGAAACAAGTTTATAAAAACTTA
|
||||||
|
AAGAAAAAAACGAAGCACAGGGGGGAAATTAAAACGAAAGCTCCAACGATCAAATAATCT
|
||||||
|
AAAAAACAAAAAATATAAAACTGATATTACTTTAAAAATCTAGAAATAAATATATTACTG
|
||||||
|
GTTAACAATTCATATGGTGAATTACGCTGTAAGCGATATGCTTACTCGAATCCGAAACGG
|
||||||
|
AATTCGAGTTAAAAAAACAAAAGTTTCTGTTATTTCAACAAATTTAACAAGAAGTATTGC
|
||||||
|
TGAAATTTTAAAACGTGAAGGTTTTATTGAAAATTTCGCTACAACTCAAATGACAAAACC
|
||||||
|
TTCCGTTGGAAATTTAGCAACTACCGGAAATAAAAACTCTACTTTAGATATTTATCTAAA
|
||||||
|
ATGGTCTCAAAAAGACGGCTTAGGAAAAGCACAAAAAAATGTCTTAACAAACCTAAAGTG
|
||||||
|
TATTAGTCGTCCAGGTGTTCGCATTTATGCAAATGCCAATAATATTCCCCAAGTTCTTGG
|
||||||
|
TGGATTAGGCATCACAATTCTATCTACTTCAAAAGGCATCTTAACTGATTATGAAGCAAG
|
||||||
|
AAATCAAAAAGTTGGTGGAGAAGTTCTATGTATGCTTTGGTAAAACCTATTTAACTAGCC
|
||||||
|
AATTGCTGAACAACCTTACACTCAAGGGGTTTGAGCGGTTTGACCTGGTGTGCTTAAGCG
|
||||||
|
CTTGGACCTGGTGTGATTGAGCGGACCTTTTAGGTCATATATTAAGCTCAATCACACCAG
|
||||||
|
AGCTGGGGGGCCCCTTCAGGCCTTCGGCCCTCAAAGGGGTGAGCGCTTT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012101_388.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_012101_388 count=1; cluster_weight=1; cluster=RRNA16S_NC_012101_388; cluster_score=1.000000; cluster_center=True;
|
||||||
|
atcgattaattcaacttgctttaccacgtattcgagattttcaaggtttaagccaacaaagttttgatggtcatggaaactataccttaggtttaaaagaacaattaatgttcccagaaattgattacgacaaaatcgaaaaatctcgagggatggatatttcaatcgttacttcagccaaaaatgatcaagatgcttttttgctcttaaaagcattaggaatgccatttaaagctgcttaaaattaacttcttttatttctttaaaattaaaatttcttttactgtaattacaagttgaaatattaaatttgttcttttgccgttttcggaggaaagaagttctcccttttgcaactcatcggcttgaatgtttttgtaaagagaatagaaatgaagtttactttgttgctctttctaagcaaactgtatacccttctctctggaggaccaaagggccaaaggcctcccccttcgggggaggaacggagttcttcccacgcgatcctccccccatttgcggggaggccttcggccctcaaggggaaacccagctcgtcccccttccactttgacctggtgtgcttcagcgctttgacctggtgtgcttcagagctttgacctttcaggccataaataaaagctcacccctttgagacctttggtcctacggtcctttcaagtaataaataaagctcaagcacaccaggtcaaagcgcgcaaatgaacaaggtcctcaaaagtaaaaactatccagaggaaacaagtttataaaaacttaaagaaaaaaacgaagcacaggggggaaattaaaacgaaagctccaacgatcaaataatctaaaaaacaaaaaatataaaactgatattactttaaaaatctagaaataaatatattactggttaacaattcatatggtgaattacgctgtaagcgatatgcttactcgaatccgaaacggaattcgagttaaaaaaacaaaagtttctgttatttcaacaaatttaacaagaagtattgctgaaattttaaaacgtgaaggttttattgaaaatttcgctacaactcaaatgacaaaaccttccgttggaaatttagcaactaccggaaataaaaactctactttagatatttatctaaaatggtctcaaaaagacggcttaggaaaagcacaaaaaaatgtcttaacaaacctaaagtgtattagtcgtccaggtgttcgcatttatgcaaatgccaataatattccccaagttcttggtggattaggcatcacaattctatctacttcaaaaggcatcttaactgattatgaagcaagaaatcaaaaagttggtggagaagttctatgtatgctttggtaaaacctatttaactagccaattgctgaacaaccttacactcaaggggtttgagcggtttgacctggtgtgcttaagcgcttggacctggtgtgattgagcggaccttttaggtcatatattaagctcaatcacaccagagctggggggccccttcaggccttcggccctcaaaggggtgagcgcttt
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_012575_355 count=1; cluster_weight=1; cluster=RRNA16S_NC_012575_355; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAACACATCAAGGAGAGTTTGATCCTGGCTCAGAAGGAACGCTGGCAGCGTGCATAACAC
|
||||||
|
ATGCAAGTCGAACGATGAAACATTCTTCGGAATGTGGAAGAGTGGCGAACGGGTGAGGAA
|
||||||
|
CACGTAAGAATCTGCCCCTCGGTCGGGGACAACTCTTGGAAACGAGAGCTAATACCCGAT
|
||||||
|
ACGCTGTGGAGTGAAAGAATTTCGCCGAGGGATGATCTTGCGTCTGATTAGCTAGTTGGT
|
||||||
|
GTGGTAATGGCATACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGATGAACAGCCACAT
|
||||||
|
TGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATG
|
||||||
|
GACGAAAGTCTGACGGAGCGACGCTGCGTGAAGGATGACGGCCTGCGGGTTGTAAACTTC
|
||||||
|
TTTTCTCGAAGAAGAAGCTCTGACGGTATTCGAGGAATAAGCATCGGCTAACTCCGTGCC
|
||||||
|
AGCAGCCGCGGTAATACGGAGGATGCAAGTGTTATTCGGAATGATTGGGCGTAAAGCGTC
|
||||||
|
TGTAGGCTGTATAGAAAGTCTTTTGTTAAATGCCTCGGCTCAACCGAGATCCAGCAAAGG
|
||||||
|
AAACTTCTATACTTGAGGGAAGTAGAGGTACAGGGAATTCCCGGTGGAGCGGTGAAATGC
|
||||||
|
GTAGATATCGGGAGGAACACCAATATGGCGAAGGCACTGTACTGGGCTTTACCTGACGCT
|
||||||
|
CAGAGACGAAAGCTAAAGGAGTGATTAGGATTAGATACCCTAGTAATTTTAGCCGTAAAC
|
||||||
|
GATGGAAACTCACTGCCGAGCGAAATACAACGAGCGGTGGTCAAGCTAACGCGTGAAGTT
|
||||||
|
TCCCGCCTGGGGATTACGCTTGCAAAAGTGAAACTCAAAGGAATTGACGGGGACCCGCAC
|
||||||
|
AAGCGGTGGAGTATGTGGTTTAATTCGATGCAACACGAAGAACCTTACCAGGGTTTGAAA
|
||||||
|
TCATTTCAAAACTCCTTGAAAGAGGAGCCTCCTTCGGGATGAAATGACAGGTGGTGCATG
|
||||||
|
GCTGTCGTCAGCTCGTGTTGTGAAATGTCGAGTTAAGTCTCGTAACGAGCGCAACCCATG
|
||||||
|
TCTCTTGTTGCTCACTGAGTGCTTAAGAGAGACTGCCGACCAACATCGGAGGAAGGTGTG
|
||||||
|
GATGATGTCAAGTCAGCATGCCCCTTACATCCTGGGCTACACACGTACTACAATGGTAGG
|
||||||
|
GACAATGAGCTGCGATCCTGCGAAGGCTAGCCAATCTCAAAAACCCTATCTCAGTTCGGA
|
||||||
|
TTGTACTCTGCAACTCGAGTACATGAAGGTGGAATCGCTAGTAATCGCTGGTCAGCTATA
|
||||||
|
CAGCGGTGAATACGTTCCCGGGTCTTGTACACACTGCCCGTCACACCATGGAAGCCGACT
|
||||||
|
CTTCCCTAAGTCGTTACTCGAACCCATTGGGACGAGGATGCCGAAGGCAGGGTTGGTGAC
|
||||||
|
TGGGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGAATACCTCCTTTT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_012575_355.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_012575_355 count=1; cluster_weight=1; cluster=RRNA16S_NC_012575_355; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaacacatcaaggagagtttgatcctggctcagaaggaacgctggcagcgtgcataacacatgcaagtcgaacgatgaaacattcttcggaatgtggaagagtggcgaacgggtgaggaacacgtaagaatctgcccctcggtcggggacaactcttggaaacgagagctaatacccgatacgctgtggagtgaaagaatttcgccgagggatgatcttgcgtctgattagctagttggtgtggtaatggcataccaaggcgacgatcagtagctggtctgagaggatgaacagccacattggaactgagacacggtccaaactcctacgggaggcagcagtggggaattttccgcaatggacgaaagtctgacggagcgacgctgcgtgaaggatgacggcctgcgggttgtaaacttcttttctcgaagaagaagctctgacggtattcgaggaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcaagtgttattcggaatgattgggcgtaaagcgtctgtaggctgtatagaaagtcttttgttaaatgcctcggctcaaccgagatccagcaaaggaaacttctatacttgagggaagtagaggtacagggaattcccggtggagcggtgaaatgcgtagatatcgggaggaacaccaatatggcgaaggcactgtactgggctttacctgacgctcagagacgaaagctaaaggagtgattaggattagataccctagtaattttagccgtaaacgatggaaactcactgccgagcgaaatacaacgagcggtggtcaagctaacgcgtgaagtttcccgcctggggattacgcttgcaaaagtgaaactcaaaggaattgacggggacccgcacaagcggtggagtatgtggtttaattcgatgcaacacgaagaaccttaccagggtttgaaatcatttcaaaactccttgaaagaggagcctccttcgggatgaaatgacaggtggtgcatggctgtcgtcagctcgtgttgtgaaatgtcgagttaagtctcgtaacgagcgcaacccatgtctcttgttgctcactgagtgcttaagagagactgccgaccaacatcggaggaaggtgtggatgatgtcaagtcagcatgccccttacatcctgggctacacacgtactacaatggtagggacaatgagctgcgatcctgcgaaggctagccaatctcaaaaaccctatctcagttcggattgtactctgcaactcgagtacatgaaggtggaatcgctagtaatcgctggtcagctatacagcggtgaatacgttcccgggtcttgtacacactgcccgtcacaccatggaagccgactcttccctaagtcgttactcgaacccattgggacgaggatgccgaaggcagggttggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgtggctggaatacctcctttt
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_014346_349 count=1; cluster_weight=1; cluster=RRNA16S_NC_014346_349; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTTCTAGTGCTCGACGTCCTGTTGGACCCACACCAATCCATCCCGAACTTGGTAGTGAA
|
||||||
|
ATAATAGGAGGAAAAAGTAGCCCTGCAAGGGGTGCCTTGCGGAACTCTTTTTCTAGTGCT
|
||||||
|
AGGAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014346_349.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014346_349.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_014346_349 count=1; cluster_weight=1; cluster=RRNA16S_NC_014346_349; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ttttctagtgctcgacgtcctgttggacccacaccaatccatcccgaacttggtagtgaaataataggaggaaaaagtagccctgcaaggggtgccttgcggaactctttttctagtgctaggat
|
@ -0,0 +1,5 @@
|
|||||||
|
>RRNA16S_NC_014573_300 count=1; cluster_weight=1; cluster=RRNA16S_NC_014573_300; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TCTCATGGAGAGTTTGATCCTGGCTCAGGATGAACACTGGCCGTATGCTTAACACATGCA
|
||||||
|
AGTCAAACGGGGAGGGTGGTGTTTCCAGTGGCGAACGGGTGAGTAACGCGTAAGAACCTG
|
||||||
|
CCGGGAACAACAGCTAGAAACGGCTGCTAATACCCTGTAGGCTGAGGAGCAAGAGTAAGC
|
||||||
|
ATCC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014573_300.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_014573_300.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_014573_300 count=1; cluster_weight=1; cluster=RRNA16S_NC_014573_300; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tctcatggagagtttgatcctggctcaggatgaacactggccgtatgcttaacacatgcaagtcaaacggggagggtggtgtttccagtggcgaacgggtgagtaacgcgtaagaacctgccgggaacaacagctagaaacggctgctaataccctgtaggctgaggagcaagagtaagcatcc
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_015359_405 count=1; cluster_weight=1; cluster=RRNA16S_NC_015359_405; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ATTTATGTCGTTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCCCGAACTAA
|
||||||
|
GAAGTGAAACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGTCTA
|
||||||
|
ATGCAAGGTACTTTCAAAAATATACGATCC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015359_405.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015359_405.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_015359_405 count=1; cluster_weight=1; cluster=RRNA16S_NC_015359_405; cluster_score=1.000000; cluster_center=True;
|
||||||
|
atttatgtcgttaccttgtattcttgcttgcatggaaccaccttatccatcccgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagtctaatgcaaggtactttcaaaaatatacgatcc
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_015645_335 count=1; cluster_weight=1; cluster=RRNA16S_NC_015645_335; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTCTCGGTGCCCACGTTCAATAGGACCCACGTCAATCCATCCCGAACTTGATAGTGAAAC
|
||||||
|
TGTTGAAGAGATTGTAAAGCTGCAAGGGGGGCTTTGTGGATTTACAATCTTGGTGCCGGG
|
||||||
|
AA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015645_335.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_015645_335.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_015645_335 count=1; cluster_weight=1; cluster=RRNA16S_NC_015645_335; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ttctcggtgcccacgttcaataggacccacgtcaatccatcccgaacttgatagtgaaactgttgaagagattgtaaagctgcaaggggggctttgtggatttacaatcttggtgccgggaa
|
61
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.align.fasta
Normal file
61
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.align.fasta
Normal file
@ -0,0 +1,61 @@
|
|||||||
|
>RRNA16S_NC_016732_352 count=1; cluster_weight=1; cluster=RRNA16S_NC_016732_352; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAAAAATATCAATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAAC
|
||||||
|
ACATGCAAGTCGTACGGGAAAGATTTCTATTTTTCCTAGTGGCGGACGGGTGCGTAACAC
|
||||||
|
GTAAGAACCTACCTTTTGGAGGGGGATAACATCGGGAAACTGATGCTAATACCCCGTAAT
|
||||||
|
AGCTGAGGAGTGAAAGCGGTTTTCCGCGCCAAGAGAGGGGCTTGCGGCTGATTAGCTAGT
|
||||||
|
TGGTGGGGGTAAAGGCCTCCCAAGGCCACGATCAGTAGCTGGTTTGAGAGGACGATCAGC
|
||||||
|
CACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTCCA
|
||||||
|
CAATGGGCGAAAGCCTGATGGAGCAATACCGCGTGGGGGATGAAGGTTCGTGGATTAGTT
|
||||||
|
TATGGTCCACTTGTAAGTAAGGTTAGTTGTTAATTAACATATGACAATTTATCGAAGAAA
|
||||||
|
ATTCTATTACGAGGCGCCCGCAGACATCGTCGAGGACGACGAGTCTAGGTCGCCTCGTAG
|
||||||
|
AGCTCGCCTCGCAGAGGCGACCTACAGAATTTTCTTCGAGAACGACCCCGCCCAAAGATT
|
||||||
|
TTCAATATCCTAAAGGATATTGCCCGTGAGGGCAACTTCGATATTTGTTTTTTGTTAAGA
|
||||||
|
TTCATTAATCTTACTTACAATAATAAATTCGGTGAATACAGGGACGCTAAGGTATACAAT
|
||||||
|
AAATTAGTATACTATGCAAATCTGTAGCGAAGTGCGGGGAAATCTCAAGAAAAAAAAAAA
|
||||||
|
ATTGTACCCGTAAACGCCTAAAGACTAGTTAGTGAGGATGAGAAACCAATAATCTAACCA
|
||||||
|
CGAGCGCCGAACAACCTAATTTTTATTAGGTTGATGATATAGTCTAATCTTAAAGGAAAC
|
||||||
|
TTTAAGAAGTATTGTATAAATAACAATACGTTAATAATATGCGTAAACCCCTTTTCTCAG
|
||||||
|
AGAAGAAGTTCTGACGGTATCTGAGGAATAAGCTCCGGCTAAGAGATTGGCCTCCTGTTT
|
||||||
|
TGTGAAAAACAGGGAAAATTTTCGGCTCATAACGATGAATCCTTAATTTAAAAATAATGG
|
||||||
|
ATAAGGTGATATCGTGGGAAGTCTAAGAAACGTAAAATGAATTACGTAAGACCCCGTAAC
|
||||||
|
GACTGAGGAAAAGCATAAGCTGAGTACGAGATAAGATGATAGTTTTATCCTGGATAGTTT
|
||||||
|
TATCCTGTTGGAATAAAACTGAAGTCTTATAAAACGCCGACTACTTTAAAAAAGAAAATA
|
||||||
|
AAAAGTAGAATGTATAGTCTATGCCGAAGTTAGAAACTTCGGGCTACATGAACTCTGTGC
|
||||||
|
CAGCAGCCGCGGTTTGGCTAAAATTGCCGCAATGTATCTTAAGATACATTAAGAATTCTG
|
||||||
|
CTTATATTGAAGGAGCCTACACAAAAAGTAGGTAATTTCAAGGGAAGCTTCTCTTTAATT
|
||||||
|
TAAAGAGATAGCCCCTTAACGACTGACCCGAAAGGGGAGACTGATTATTGTTTATCATAA
|
||||||
|
TATTTTAAACAAAATCGGTAATACGCAGAACCTTAGCACAATAAAAGAAACCTAGTTATG
|
||||||
|
TGTAAACTAGAAAAACAGGAGAATAATAATAATTATGAAGATGCGATGAAAGTTGTTCGA
|
||||||
|
GAACTTTACAAATAGTTACACATGGTTAACAACCTAAGGGTTCTGCTAAGGATAAGATAT
|
||||||
|
AGTCTGATCCCTATTGTAAAATAGGGTGTAATCGAATACAGGGGGAGCAAGCGTTATCCG
|
||||||
|
GAATGATTGGGCGTAAAGCGTCTGTAGGTGGTTCTTTAAGTCTACTGTCAAATACGTTGG
|
||||||
|
CTCAACCAACGGCAGGCAGTGGAGTACTAAAGAACTAGAGTGCGGTAGAGGTAGAGGGAA
|
||||||
|
TCCCTAGCGTAACAGTGAAATGTGTAGATTTTAGGGAGAACACCAGCGGCGAAGGCGCTC
|
||||||
|
TACTGGGCCGATACTGACACTGAGAGACGAAAGCTAGAGGAGCGAATAGGATTAGATAAA
|
||||||
|
TCTGGGGCGCTCTAAAATATACCCCAAAGTGTCCTCATTTCACTGAAAGGTGAGATGTGA
|
||||||
|
ACCTAGCTATATCGGGGAAGGTCATGCTTAAAACATGAATAATCCCGAGGGAAGTATGTA
|
||||||
|
TTTATAAGGTATACCTTTTTAAAACATACCCCTTAGAGACTAAACACTCTGGAATTATAA
|
||||||
|
AACTTTTAGGTGGAGTTTTATACAACTTTTGTACCAAAAGGTTCCAGAGTTGTTGCAACG
|
||||||
|
CTGGGCTTCCGAAATAAAAGAGGCGGACAAAACAACTTTATTGCCCTCATGGGCAACAAA
|
||||||
|
GTTGCCCGTCCCCTAAGGGCTAGGACCTTGTCCGTCGCGTGAGGGGAACAATTTTGTTGT
|
||||||
|
TTTGTCCTGAGGAAAAAACCTTTGGTTTTTTCCGACTTGTTCAACCAGAATTTCGCGCAT
|
||||||
|
ACGTGGAAGACTTTTATGAACGAGTTATAAACGGAAGATGATATAGTCCACTGGTGGGTT
|
||||||
|
CACCTAATAAATGGCCCGCCTTTGACCCTAGTAGTTCTAGCTGTAAACGATGGAAACTAA
|
||||||
|
GAGGGGGTAACCCCCTTCTGTAGCTAACGCGTTAAGTTTCCCGCCTGGGGAGTATGCTCG
|
||||||
|
CAAGAGTGAAACTCAAAGGAATTGACGGGAGACCACACAATAGGTAAACCGATAATCTGC
|
||||||
|
CTAGTGGCTTTGTGAAAAGCTATAGTCTTTTAAACACTAAAAGTCTTCTCGTCAAAAAAG
|
||||||
|
AAATAGTGGCATAACAATAAACTTTATTGTTATGTAAGGCAAAAAACTGGCTCAAAACGA
|
||||||
|
CGAAAATCGAGAATTCTCGGCAACATCGTGGATTTTAAAATATACACCGGACCAGGGCCC
|
||||||
|
CTTGGTTTTTTCCGACTCGTATAGTTATATTAGTTTGGTGTATAATATTTTAAAGTCTGT
|
||||||
|
AACGACTCATTCGTATCTTAGTTGAGATAGTTTACTTTTTTAAAAAAAGTAAATAAGAAT
|
||||||
|
GGACTATACAAACGTATAGTAATACGGCCAGCTCTTTTAAGGAACTCCTTTTTTTATTTT
|
||||||
|
TATTTTTATTTTTATTTTTATTTTTATTTTTATTTCAAAACTTATTGAGTTCCTCAAGGT
|
||||||
|
TAACAACCTTTAATAAAAGATGAATGCATAGTCTAAATTCCATTGAAAAATGGATAGTCA
|
||||||
|
TAAATCTCTTTTGGGATTATGCGGTTTAATTTGATGCAACGCAAAGAACCTTACCAGGGT
|
||||||
|
TTGACATGTCTAGAATTTTTCAGAAATGAAAAAGTGCTTCCTTTTTATGAAAGGAAGAAC
|
||||||
|
TAGAACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCGTTGACGTGTATGGTTAAGTCC
|
||||||
|
TGCAACGAGCGCAACCCTCGTCTTTAGTTACTTTCCAAGTTCTCTAAAGAGACTGCGCGC
|
||||||
|
GCAAGCGCTGAGGAAGGTGAGGATGACGTCAAGTCAGCATGCCCCTTACACCCTGGGCGA
|
||||||
|
CACGCGTAATACAATGGTTGGGACAATCAGAAGCTACCCCGCAAGGGCACGCCAATCTGT
|
||||||
|
TAAACTCAACCCTAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGCCGGAATCTAT
|
||||||
|
AGTAATCGCCAGTCAGCTATATGGCGGTGAATACGTTCCTGGTCTCTGT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016732_352.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_016732_352 count=1; cluster_weight=1; cluster=RRNA16S_NC_016732_352; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaaaaatatcaatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgtacgggaaagatttctatttttcctagtggcggacgggtgcgtaacacgtaagaacctaccttttggagggggataacatcgggaaactgatgctaataccccgtaatagctgaggagtgaaagcggttttccgcgccaagagaggggcttgcggctgattagctagttggtgggggtaaaggcctcccaaggccacgatcagtagctggtttgagaggacgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccacaatgggcgaaagcctgatggagcaataccgcgtgggggatgaaggttcgtggattagtttatggtccacttgtaagtaaggttagttgttaattaacatatgacaatttatcgaagaaaattctattacgaggcgcccgcagacatcgtcgaggacgacgagtctaggtcgcctcgtagagctcgcctcgcagaggcgacctacagaattttcttcgagaacgaccccgcccaaagattttcaatatcctaaaggatattgcccgtgagggcaacttcgatatttgttttttgttaagattcattaatcttacttacaataataaattcggtgaatacagggacgctaaggtatacaataaattagtatactatgcaaatctgtagcgaagtgcggggaaatctcaagaaaaaaaaaaaattgtacccgtaaacgcctaaagactagttagtgaggatgagaaaccaataatctaaccacgagcgccgaacaacctaatttttattaggttgatgatatagtctaatcttaaaggaaactttaagaagtattgtataaataacaatacgttaataatatgcgtaaaccccttttctcagagaagaagttctgacggtatctgaggaataagctccggctaagagattggcctcctgttttgtgaaaaacagggaaaattttcggctcataacgatgaatccttaatttaaaaataatggataaggtgatatcgtgggaagtctaagaaacgtaaaatgaattacgtaagaccccgtaacgactgaggaaaagcataagctgagtacgagataagatgatagttttatcctggatagttttatcctgttggaataaaactgaagtcttataaaacgccgactactttaaaaaagaaaataaaaagtagaatgtatagtctatgccgaagttagaaacttcgggctacatgaactctgtgccagcagccgcggtttggctaaaattgccgcaatgtatcttaagatacattaagaattctgcttatattgaaggagcctacacaaaaagtaggtaatttcaagggaagcttctctttaatttaaagagatagccccttaacgactgacccgaaaggggagactgattattgtttatcataatattttaaacaaaatcggtaatacgcagaaccttagcacaataaaagaaacctagttatgtgtaaactagaaaaacaggagaataataataattatgaagatgcgatgaaagttgttcgagaactttacaaatagttacacatggttaacaacctaagggttctgctaaggataagatatagtctgatccctattgtaaaatagggtgtaatcgaatacagggggagcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggttctttaagtctactgtcaaatacgttggctcaaccaacggcaggcagtggagtactaaagaactagagtgcggtagaggtagagggaatccctagcgtaacagtgaaatgtgtagattttagggagaacaccagcggcgaaggcgctctactgggccgatactgacactgagagacgaaagctagaggagcgaataggattagataaatctggggcgctctaaaatataccccaaagtgtcctcatttcactgaaaggtgagatgtgaacctagctatatcggggaaggtcatgcttaaaacatgaataatcccgagggaagtatgtatttataaggtatacctttttaaaacataccccttagagactaaacactctggaattataaaacttttaggtggagttttatacaacttttgtaccaaaaggttccagagttgttgcaacgctgggcttccgaaataaaagaggcggacaaaacaactttattgccctcatgggcaacaaagttgcccgtcccctaagggctaggaccttgtccgtcgcgtgaggggaacaattttgttgttttgtcctgaggaaaaaacctttggttttttccgacttgttcaaccagaatttcgcgcatacgtggaagacttttatgaacgagttataaacggaagatgatatagtccactggtgggttcacctaataaatggcccgcctttgaccctagtagttctagctgtaaacgatggaaactaagagggggtaacccccttctgtagctaacgcgttaagtttcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggagaccacacaataggtaaaccgataatctgcctagtggctttgtgaaaagctatagtcttttaaacactaaaagtcttctcgtcaaaaaagaaatagtggcataacaataaactttattgttatgtaaggcaaaaaactggctcaaaacgacgaaaatcgagaattctcggcaacatcgtggattttaaaatatacaccggaccagggccccttggttttttccgactcgtatagttatattagtttggtgtataatattttaaagtctgtaacgactcattcgtatcttagttgagatagtttacttttttaaaaaaagtaaataagaatggactatacaaacgtatagtaatacggccagctcttttaaggaactcctttttttatttttatttttatttttatttttatttttatttttatttcaaaacttattgagttcctcaaggttaacaacctttaataaaagatgaatgcatagtctaaattccattgaaaaatggatagtcataaatctcttttgggattatgcggtttaatttgatgcaacgcaaagaaccttaccagggtttgacatgtctagaatttttcagaaatgaaaaagtgcttcctttttatgaaaggaagaactagaacacaggtggtgcatggctgtcgtcagctcgtgcgttgacgtgtatggttaagtcctgcaacgagcgcaaccctcgtctttagttactttccaagttctctaaagagactgcgcgcgcaagcgctgaggaaggtgaggatgacgtcaagtcagcatgccccttacaccctgggcgacacgcgtaatacaatggttgggacaatcagaagctaccccgcaagggcacgccaatctgttaaactcaaccctagttcggattgtaggctgcaactcgcctacatgaagccggaatctatagtaatcgccagtcagctatatggcggtgaatacgttcctggtctctgt
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_016733_406 count=1; cluster_weight=1; cluster=RRNA16S_NC_016733_406; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ATTTTTGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCCTAACACATGCA
|
||||||
|
AGTCGAACTAGCTCTAGCGCAAGTTAGAGTGGGTGGCGGACGGGTGAGGAACACGTAAGA
|
||||||
|
ACCTACCCTTTGGAGGAGGATAACTGTTGGAAACGGCAGCTAATACTCCATATGCTGAGG
|
||||||
|
AGTAAAAGGTCGAAAGGCCGCCAAGGGATGGGCTTGCGTCTGATTAGCTAGTTGGTGAGG
|
||||||
|
TAAATGCTTACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGG
|
||||||
|
ACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTCCGCAATGGGCG
|
||||||
|
AAAGCCTGACGGAGCAATACCGCGTGAAGGATGAAGGCCTGTGGGTTGTAAACTTCTTTT
|
||||||
|
CTCAGAGACGAATAAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCA
|
||||||
|
GCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTA
|
||||||
|
GGTGGCTTTCCAAGTCTTTTGTCAAATCCCAGAGCTTAACTTTGGATCGGCACGAGAAAC
|
||||||
|
TCGAGAGCTTGAGTATGGTAGGGGCAGAGGGAATTCCCGGTGTAGCGGTGAAATGCGTAG
|
||||||
|
AGATCGGGAAGAACACCGATGGCGAAAGCACTCTGCTGGGCCATTACTGACACTGAGAGA
|
||||||
|
CGAAAGCTAAGGGAGCGAATAGGATTAGATACCCTAGTAGTCTTAGCCGTAAACGATGGA
|
||||||
|
AACTAAGTGCTTGGGCCGCGAGTAATCGCTGCTTGAGTCCTGTAGCTAACGCGTTAAGTT
|
||||||
|
TCCCGCCTGGGAAGTATGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCAC
|
||||||
|
AAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGGCTTGACA
|
||||||
|
TGCCACTCTTTCGGGAGGTCATGGTGAAAGCCAGTTTAGGACACAGGTGGTGCATGGCTG
|
||||||
|
TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCTC
|
||||||
|
TTGTTGCAACTTTGTTGTTATCGAGAGAGACTGCCGGTGATAAGTCGGAGGAAGGTGGGG
|
||||||
|
ATGACGTCAAGTCAGCATGCCCCTTACGCCCTGGGCAACACACGTGCTACAATGGCCAGG
|
||||||
|
ACAAAGAGATGCAACCTCGCAAGAGCAAGCCAACCTCAAAAACCTGGTCTCAGTTCGGAT
|
||||||
|
TAGTCTCTGCAACCCGAGACTATGAAGCCGGAATCGCTAGTAATCGCTGGTCAGCTATAC
|
||||||
|
AGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGAGCTGGCTA
|
||||||
|
TGCCCAAAGTCGTTACCCCAACCGTTTGGAGGGGGATGCCTAAGGCAGAGCTAGTGACTG
|
||||||
|
GGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_016733_406.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_016733_406 count=1; cluster_weight=1; cluster=RRNA16S_NC_016733_406; cluster_score=1.000000; cluster_center=True;
|
||||||
|
atttttggagagtttgatcctggctcaggatgaacgctggcggtatgcctaacacatgcaagtcgaactagctctagcgcaagttagagtgggtggcggacgggtgaggaacacgtaagaacctaccctttggaggaggataactgttggaaacggcagctaatactccatatgctgaggagtaaaaggtcgaaaggccgccaagggatgggcttgcgtctgattagctagttggtgaggtaaatgcttaccaaggcgacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtgaaggatgaaggcctgtgggttgtaaacttcttttctcagagacgaataaatgacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaagacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtctgtaggtggctttccaagtcttttgtcaaatcccagagcttaactttggatcggcacgagaaactcgagagcttgagtatggtaggggcagagggaattcccggtgtagcggtgaaatgcgtagagatcgggaagaacaccgatggcgaaagcactctgctgggccattactgacactgagagacgaaagctaagggagcgaataggattagataccctagtagtcttagccgtaaacgatggaaactaagtgcttgggccgcgagtaatcgctgcttgagtcctgtagctaacgcgttaagtttcccgcctgggaagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccactctttcgggaggtcatggtgaaagccagtttaggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtctcttgttgcaactttgttgttatcgagagagactgccggtgataagtcggaggaaggtggggatgacgtcaagtcagcatgccccttacgccctgggcaacacacgtgctacaatggccaggacaaagagatgcaacctcgcaagagcaagccaacctcaaaaacctggtctcagttcggattagtctctgcaacccgagactatgaagccggaatcgctagtaatcgctggtcagctatacagcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccacgggagctggctatgcccaaagtcgttaccccaaccgtttggagggggatgcctaaggcagagctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttt
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_020361_348 count=1; cluster_weight=1; cluster=RRNA16S_NC_020361_348; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTTCCTTGAGTAAACCAGGAATTTATACGCCCGGAATGAGTCCTAATTCCTCGAGTACA
|
||||||
|
AATGTGTAAGAGAAATAGTGTACTGACTAGGTCAATTTATTCCATGAGTCAGGAGAGCGA
|
||||||
|
TCGGGCTGCCAAGATAAAAGAATTTCATCTTTCATTATGACGAATGAGATCTTTGGATAG
|
||||||
|
AAGATCTCAGATTGAGATTTGCTATTCTGTCCCAACTAGATCGCACCATGTAACATTTTA
|
||||||
|
CAATCCAAGAAGTTTTTCTAGGAACATAGGCGAGGTAATCCTGAAATGTTTGAATTCCAA
|
||||||
|
AGAGACGCAAACAAGCATAGATCTTGGCAGCAATGCTTTTTATACCCACTCTTTTTTCAG
|
||||||
|
CAAGATCTTTATGCAATTGCTCATGATCATCATTCAGATAGAGCAAATTGCTCTGAACCC
|
||||||
|
TCGGAAATTCGGATTTCCAATGAGTTTAGTTTTCTAACTGTAAAACGTTCGATTAATCGC
|
||||||
|
ATACGTAAATTAAAAGATTCAATTTTTTTATTTGGGAATTTCCATCCAAATCAATGGATG
|
||||||
|
GATCACAATAGGAATTCTTATTCCTTCTTGATATTAGAAGGCTTTACTGTAGTCTTGGAA
|
||||||
|
GTTTCATTCTCAATACGAGCCAAATATTCTAAATGTATGAATGGATGCAAAAGTTTCCGA
|
||||||
|
TCCATCCATGGTCTATTCCCTCTTATAGAAGATAAATTTCCACATTCAAATTATATATCA
|
||||||
|
GATATACGACTACCTTACGCTATTCATCCAGAAATTTTGGTTCGAATCTTTCGTCGCTGG
|
||||||
|
ATCCGAGACGCTCCTTGTTTGCATCTATTGCGATGCATTCTATATGAATGTCGAAATAGT
|
||||||
|
TTGAGTTCCGAGAATTCGCAAAAAGCAATTTTTGTTAGCCTGAAAGAGAATAAAAAATTC
|
||||||
|
TATCTGTTCTTGTGGAATTCTTATGTTTGTGAATGTGAATCCATTCTAGTTCCCCTTATG
|
||||||
|
AAGCGATTTTCTCATTCACAATTGTTGTCCTATGGATCTCTTCCCGAACGAACCCATTTT
|
||||||
|
GATCGAAAAATCAAGCATATTCTCATATTTCGTTGTACAATTTCAACGAAAAGGATCTGG
|
||||||
|
TTCTTAAAGGATCCTTTATTTCACTATGTGAGATATCGAGAAAGATCCCTCGTAGCGCTG
|
||||||
|
AAGGGTAGCGCACTTCAAGAGAAAAAATGGAAATATCATCTTCTCCACTTTTGGCTACGT
|
||||||
|
TATTCCCATCTTTGGCCCCAACCATATAGGGTATGGATTTTCGAATTACCCAGGAATTGT
|
||||||
|
TTTTCTTTTCTCGGGTTCTCTCTGAGTATAAAAATGAAATATCTCGCGGTTAGAACAAAA
|
||||||
|
ATGCTAGATAATTCATTCATTACTGACCTCATTACCAATGAAATTCATCCAATAGCTCCA
|
||||||
|
ATTAGATCAATCATTTCTTTCTTGGCTAAAGAAAGGTTCTGTGACATCTTTGGTCGGCCA
|
||||||
|
ATTAGTAAATTTGCCTGGGCCAGTCTGACAGATGACGATATCCTCGATCGAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_020361_348.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_020361_348 count=1; cluster_weight=1; cluster=RRNA16S_NC_020361_348; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ttttccttgagtaaaccaggaatttatacgcccggaatgagtcctaattcctcgagtacaaatgtgtaagagaaatagtgtactgactaggtcaatttattccatgagtcaggagagcgatcgggctgccaagataaaagaatttcatctttcattatgacgaatgagatctttggatagaagatctcagattgagatttgctattctgtcccaactagatcgcaccatgtaacattttacaatccaagaagtttttctaggaacataggcgaggtaatcctgaaatgtttgaattccaaagagacgcaaacaagcatagatcttggcagcaatgctttttatacccactcttttttcagcaagatctttatgcaattgctcatgatcatcattcagatagagcaaattgctctgaaccctcggaaattcggatttccaatgagtttagttttctaactgtaaaacgttcgattaatcgcatacgtaaattaaaagattcaatttttttatttgggaatttccatccaaatcaatggatggatcacaataggaattcttattccttcttgatattagaaggctttactgtagtcttggaagtttcattctcaatacgagccaaatattctaaatgtatgaatggatgcaaaagtttccgatccatccatggtctattccctcttatagaagataaatttccacattcaaattatatatcagatatacgactaccttacgctattcatccagaaattttggttcgaatctttcgtcgctggatccgagacgctccttgtttgcatctattgcgatgcattctatatgaatgtcgaaatagtttgagttccgagaattcgcaaaaagcaatttttgttagcctgaaagagaataaaaaattctatctgttcttgtggaattcttatgtttgtgaatgtgaatccattctagttccccttatgaagcgattttctcattcacaattgttgtcctatggatctcttcccgaacgaacccattttgatcgaaaaatcaagcatattctcatatttcgttgtacaatttcaacgaaaaggatctggttcttaaaggatcctttatttcactatgtgagatatcgagaaagatccctcgtagcgctgaagggtagcgcacttcaagagaaaaaatggaaatatcatcttctccacttttggctacgttattcccatctttggccccaaccatatagggtatggattttcgaattacccaggaattgtttttcttttctcgggttctctctgagtataaaaatgaaatatctcgcggttagaacaaaaatgctagataattcattcattactgacctcattaccaatgaaattcatccaatagctccaattagatcaatcatttctttcttggctaaagaaaggttctgtgacatctttggtcggccaattagtaaatttgcctgggccagtctgacagatgacgatatcctcgatcgat
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_021441_330 count=1; cluster_weight=1; cluster=RRNA16S_NC_021441_330; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TGTATATACATACATAGGATTACCTACCAATGGAAACTGCAACCTTAGTCGCTATCTCCA
|
||||||
|
TATCTTGTTTACTTGTTAGCTTTACTGGTTATGCCCTATACACCGCCTTTGGGCAACCTT
|
||||||
|
C
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_021441_330.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_021441_330.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_021441_330 count=1; cluster_weight=1; cluster=RRNA16S_NC_021441_330; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tgtatatacatacataggattacctaccaatggaaactgcaaccttagtcgctatctccatatcttgtttacttgttagctttactggttatgccctatacaccgcctttgggcaaccttc
|
@ -0,0 +1,7 @@
|
|||||||
|
>RRNA16S_NC_023356_295 count=1; cluster_weight=1; cluster=RRNA16S_NC_023356_295; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
|
||||||
|
AGTTGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCC
|
||||||
|
CTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGGGCAAAA
|
||||||
|
GGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTT
|
||||||
|
ACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACA
|
||||||
|
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023356_295.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023356_295.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_023356_295 count=1; cluster_weight=1; cluster=RRNA16S_NC_023356_295; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tctcatggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagttggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaactggaaacggttgctaataccccgtaggctgaggggcaaaaggaggaatccgcccgaggaggggctcgcgtctgattagctagttggtgaggcaatagcttaccaaggcgatgatcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaa
|
@ -0,0 +1,9 @@
|
|||||||
|
>RRNA16S_NC_023465_409 count=1; cluster_weight=1; cluster=RRNA16S_NC_023465_409; cluster_score=1.000000; cluster_center=True;
|
||||||
|
CATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGTGAGT
|
||||||
|
CGCACGGGAAGTGGTGTTTCTAGTGGCGGACGGGTGAGTAACGCGCAAGAACCTGCCCTT
|
||||||
|
GGGAGGGGAACAAGGGCTGGAAACGGTTGCTAATACCCCCCCGCTGAGGAGCAAAAGGAG
|
||||||
|
GAATCCGCCTGAGGAAGGGCTTGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCA
|
||||||
|
AGGTTATGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGC
|
||||||
|
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGGACGAAAGCCTGACG
|
||||||
|
GAGCAATGCCGCGTGGAGGTAAAAGGCCCACGGGTCATGAACTTTTTTTACCAGAGAAGA
|
||||||
|
AGCAA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023465_409.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023465_409.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_023465_409 count=1; cluster_weight=1; cluster=RRNA16S_NC_023465_409; cluster_score=1.000000; cluster_center=True;
|
||||||
|
catggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgtgagtcgcacgggaagtggtgtttctagtggcggacgggtgagtaacgcgcaagaacctgcccttgggaggggaacaagggctggaaacggttgctaatacccccccgctgaggagcaaaaggaggaatccgcctgaggaagggcttgcgtctgattagctagttggtgaggcaatagcttaccaaggttatgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaatggggacgaaagcctgacggagcaatgccgcgtggaggtaaaaggcccacgggtcatgaactttttttaccagagaagaagcaa
|
45
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.align.fasta
Normal file
45
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.align.fasta
Normal file
@ -0,0 +1,45 @@
|
|||||||
|
>RRNA16S_NC_023775_366 count=1; cluster_weight=1; cluster=RRNA16S_NC_023775_366; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AACAAGCATTGATCCGAAGATTCCCGAATAGGGCAACCTTTTATACTTTTTGCTGAATTC
|
||||||
|
ATAAGCAAAAAAGAGACAACTCAGTGAACTGAAACATCTTATTAACTGAAGGAAAATAAA
|
||||||
|
GCAAACGCGATTTCCCGAGTAGTGGCGAGCGAAAAGGAAACAGCCTAAACCAATTTTTAA
|
||||||
|
AATTGGGGTTGTGGGATAACCAAAAAATATTTTTAAAAATATTTTTCAAGTAGTTATTTA
|
||||||
|
ATTATAAATTAGACGAAGCAGCTGAATCCTGCACCATAGATGGTGAAAGTCCAGTCGTCA
|
||||||
|
AAAATTCAAATTTAACTATGTGTTTTTCCCAAGTAGCACGGGACACGAGAAATCCCGTGT
|
||||||
|
GAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTAGATGACCGATAGTGAAATAGT
|
||||||
|
ACCGTGAGGGAAAGGTGAAAAGAACCCCTGAAGGGGAGTGAAATAGAACATGAAATCCTA
|
||||||
|
TGCTGACAAACAGTGGGAGGTTTTTTTTAAACTGACCGCGTGCCTGTTGAAGAATGAGCC
|
||||||
|
GGCGACTTAGAAAAAGTGGCGTGGTTAAGGAAAAATTCCGAAGCCTTAGCGAAAGCGAGT
|
||||||
|
CTGAATAGGGCGATCAAATATTTTAATATTTACAATTTAGTCATTTTTTCTAGACCCGAA
|
||||||
|
CCCGGGTGATCTAACCATGACCAGGATGAAACTTGGGTGATACCAAGTGAAGGTCCGAAC
|
||||||
|
CGACCGATGTTGAAAAATCGGCGGATGAGTTGTGGTTAGCGGTGAAATACCAGTCGAACC
|
||||||
|
CGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTACATCTAGTCTATCTA
|
||||||
|
GGGGTAAAGCACTGTTTCGGTGCGGGCTGTGAAAACGGTACCAAATCGTGGCAAACTCTG
|
||||||
|
AATACTAGAAATGACGGTGTAGTAGTGAGACTGTGGGGGATAAGCTCCATTGTCAAGAGG
|
||||||
|
GAAACAGCCCAGACCACCAGCTAAGGCCCCAAAATGGTAATGTAGTGACAAAGGAGGTGA
|
||||||
|
AAATGCAAACACAACCAGGAGGTTGGCTTAGAAGCAGCCATCCTTTAAAGAGTGCGTAAT
|
||||||
|
AGCTCACTGGTACTAGCGTTTTTGCGCCGAAAATGTACGGGACTTAATTATCTGCCGAAG
|
||||||
|
CTGTGGGATATATGAAAATAATGTATATATAAAAATACAATTTATATCGGTAGGGGAGCG
|
||||||
|
TTCTGCTTTAGGGTGAAGTTTAAATGTAAGTTTAGATGGACCAAGCAGAAGTGAGAATGT
|
||||||
|
CGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGATTCCTT
|
||||||
|
CACTAGGTTCGTCCATGAAGGGTGAGTCAGGACCTAAGGCGAGGCCGAACGGCGTAGTCG
|
||||||
|
ATGGCAAACAGGTTAATATTCCTGTACTGTTTTGTATTTGATACCAGGGGACAGAAGAGG
|
||||||
|
TAACAATTAGCCGTTATTGGATTTCGGTGGAAACTTGCAAAGCTGGGAAAAGAAAAAAAA
|
||||||
|
CTTCTTCCTTTTTAAAGCTAACGAGTGATACGTTTGTATTTTATTTATAAAATATGAATT
|
||||||
|
AATTTCTTATCATATTCTCAAGAAAAGCCTGTATTATCTATAAATGCAAAACACCTGTAC
|
||||||
|
CATAAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGGGCGCGAGATAACTCTCTCTA
|
||||||
|
AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCAAGGGGTGATTTTTC
|
||||||
|
ATCTTTTGGCCGCAGTGACCAGGCCCAGGCGACTGTTTATCAAAAACACAGGTCTCCGCA
|
||||||
|
AAGTCGTAAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAAGAAGTA
|
||||||
|
GGTTATTCTTTTTTAAGAAAAAGCTTGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACT
|
||||||
|
ATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGATAAGTCCCGACCCGCACGAAAGGCG
|
||||||
|
TAACGATCTGGGCGCTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCTGTGAAGATG
|
||||||
|
CGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTGACTGTAGCCTGAAATTGAA
|
||||||
|
TTTGGGTTTTTTTTGCGCAGACTAGGTGGGAGGCGTTGATAATTTTCTTTTGGGAAAATT
|
||||||
|
GGAGCCAACAGTGAGAGACCACTCTGGAAAAGCTAGAATTCTAATGGCGTTCCTTGAAGC
|
||||||
|
AGGACGCTTGACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCATCTCTTAAAAGGTAA
|
||||||
|
CAGAGATGTGCAAAGGTTCCTTCAGGCTGGACGGAAATCAGCCGTAGAGTATAAAGGCAG
|
||||||
|
AAGGGAGCTTGACTGTAAGACCTACAAGTCAAACAGGGGCGAAAGCCGGCCTTAGTGATC
|
||||||
|
CGACGGTACCGAGTGGAAGGGCCGTCGCTAAACGGATAAAAGTTACTCTAGGGATAACAG
|
||||||
|
GCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCAT
|
||||||
|
CGCAACCTGGGGCGGTAGTACGTCCCAAGGGTTGGGCTGTTCGCCCATGAAAGCGGTACG
|
||||||
|
TGAGCTGGGTTCAGAACGT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_023775_366.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_023775_366 count=1; cluster_weight=1; cluster=RRNA16S_NC_023775_366; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aacaagcattgatccgaagattcccgaatagggcaaccttttatactttttgctgaattcataagcaaaaaagagacaactcagtgaactgaaacatcttattaactgaaggaaaataaagcaaacgcgatttcccgagtagtggcgagcgaaaaggaaacagcctaaaccaatttttaaaattggggttgtgggataaccaaaaaatatttttaaaaatatttttcaagtagttatttaattataaattagacgaagcagctgaatcctgcaccatagatggtgaaagtccagtcgtcaaaaattcaaatttaactatgtgtttttcccaagtagcacgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaacccctgaaggggagtgaaatagaacatgaaatcctatgctgacaaacagtgggaggttttttttaaactgaccgcgtgcctgttgaagaatgagccggcgacttagaaaaagtggcgtggttaaggaaaaattccgaagccttagcgaaagcgagtctgaatagggcgatcaaatattttaatatttacaatttagtcattttttctagacccgaacccgggtgatctaaccatgaccaggatgaaacttgggtgataccaagtgaaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctaggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaatcgtggcaaactctgaatactagaaatgacggtgtagtagtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagctaaggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaacacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagctcactggtactagcgtttttgcgccgaaaatgtacgggacttaattatctgccgaagctgtgggatatatgaaaataatgtatatataaaaatacaatttatatcggtaggggagcgttctgctttagggtgaagtttaaatgtaagtttagatggaccaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcactaggttcgtccatgaagggtgagtcaggacctaaggcgaggccgaacggcgtagtcgatggcaaacaggttaatattcctgtactgttttgtatttgataccaggggacagaagaggtaacaattagccgttattggatttcggtggaaacttgcaaagctgggaaaagaaaaaaaacttcttcctttttaaagctaacgagtgatacgtttgtattttatttataaaatatgaattaatttcttatcatattctcaagaaaagcctgtattatctataaatgcaaaacacctgtaccataaaccgacacaggtaggtaggtagagtataccaaggggcgcgagataactctctctaaggaactcggcaaaatgaccccgtaacttcgggagaaggggtgccaaggggtgatttttcatcttttggccgcagtgaccaggcccaggcgactgtttatcaaaaacacaggtctccgcaaagtcgtaagacaacatatgggggctgacgcctgcccagtgccggaaggttaaagaagtaggttattcttttttaagaaaaagcttgcgactgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcggataagtcccgacccgcacgaaaggcgtaacgatctgggcgctgtctcggagagagactcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagcctgaaattgaatttgggttttttttgcgcagactaggtgggaggcgttgataattttcttttgggaaaattggagccaacagtgagagaccactctggaaaagctagaattctaatggcgttccttgaagcaggacgcttgacagtttcaggtgggcagtttgactggggcggtcatctcttaaaaggtaacagagatgtgcaaaggttccttcaggctggacggaaatcagccgtagagtataaaggcagaagggagcttgactgtaagacctacaagtcaaacaggggcgaaagccggccttagtgatccgacggtaccgagtggaagggccgtcgctaaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcgcaacctggggcggtagtacgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgt
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_024167_326 count=1; cluster_weight=1; cluster=RRNA16S_NC_024167_326; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TCTCTATGAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCGGTTTGCCTAACACATGCA
|
||||||
|
AGTTGCACGGCGCCATGCCTCTCGAGGGATGGCGGAGTGGCGGACGGGTGAGGAACGCGT
|
||||||
|
AAGGACCTGCCCCTGGGAGGGGGATAACAGCTGGAAACGGCTGCTAATACCCCATATCCT
|
||||||
|
GAGGAGGGAAAGGAGAGATCCGCCCAGGGAGGGGCTTGCGTCTGATTAGCTAGTTGGGGG
|
||||||
|
GGTAATGGCCTCCCAAGGCAACGATCAGTTGCTGGTCTGAGAGGATGATCAGCCACACTG
|
||||||
|
GGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATCTTCCGCAATGGG
|
||||||
|
CGAAAGCCTGACGGGGCAATGCCGCGTGGAGGATGAAGGCCCAATGGGTCGTAAACTTCT
|
||||||
|
TTAGATCAGAGACGAAGAGATGACGGTACCTGAAGAACTAAGCATCGGCTAAACCCCGTG
|
||||||
|
CCAGCAGCCGCGGTAAGACGGGGGATGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGG
|
||||||
|
TCCGCAGGTGGCCCGGTCAGTCCGCTGTCAAAACCTGGGGCTCAACCCTGGAGAGGCGGC
|
||||||
|
GGAGACCACCGGGCTTGAGTCCGGTAGGGGCAGAGGGAATTCCCGGTGGAGCGGTGAAAT
|
||||||
|
GCGTAGAGATCGGGAAGAACGCCAAGGGCGAAGGCACTCTGCTAGGCCTGATTTCGCGAC
|
||||||
|
TGACACTCAGGGACGAGAGCCAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTGGC
|
||||||
|
CGTAAACGATGGATACCAAGCCCTGCGCGTATCGACCCGGGCAGGGCTGTAGCTAACGCA
|
||||||
|
TGAAGTATCCCGCCTGGGGAGTACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGAG
|
||||||
|
CCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGG
|
||||||
|
CTTGACATGCCGCGAACCCCCCTGAGAGGGGGGGGTGCCTTCGGGAGCGCGGACACAGGT
|
||||||
|
GGTGCATGGCTGTCGTCAGCTCGTGTCGTAAGATGTTGGGTTCAGTCCCGCAACGAGCGC
|
||||||
|
AACCCCCGTCTCTAGTTGCCCACAATTCGGCACCCTAGAGAGACCGCCGGTGTTAAGCCG
|
||||||
|
GAGGAAGGTGGGGATGAGGTCAAGTCAACATGCCCCTTTTGCCCTGGGCGACACACGTGC
|
||||||
|
TACAATGGCCGGGACAAAGAGATGCGACCCCGCAAGGGCCAGCCTGACCTCGTAAACCCG
|
||||||
|
GCCTCAGTTCGGATTGTAGGCTGCAACCCGCCTACATGAAGGAGGAATCGCTAGTAATCA
|
||||||
|
CCGGTCAGCCATACGGTGGTGAATCCGTTCCCGGGCTTTGCACACACCGCCCGTCACACT
|
||||||
|
ATGGGAATCGGCCATGCCCCAAGTCGTTACCCCAACCCGTAGGGAGGGGGATGCCAAAGG
|
||||||
|
CAGGGCTGGTGACTAAAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGA
|
||||||
|
TCACCTCCTTC
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024167_326.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_024167_326 count=1; cluster_weight=1; cluster=RRNA16S_NC_024167_326; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tctctatgagagtttgatcctggctcaggatgaacgctagcggtttgcctaacacatgcaagttgcacggcgccatgcctctcgagggatggcggagtggcggacgggtgaggaacgcgtaaggacctgcccctgggagggggataacagctggaaacggctgctaataccccatatcctgaggagggaaaggagagatccgcccagggaggggcttgcgtctgattagctagttgggggggtaatggcctcccaaggcaacgatcagttgctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaatcttccgcaatgggcgaaagcctgacggggcaatgccgcgtggaggatgaaggcccaatgggtcgtaaacttctttagatcagagacgaagagatgacggtacctgaagaactaagcatcggctaaaccccgtgccagcagccgcggtaagacgggggatgcgagcgttatccggaatgattgggcgtaaagggtccgcaggtggcccggtcagtccgctgtcaaaacctggggctcaaccctggagaggcggcggagaccaccgggcttgagtccggtaggggcagagggaattcccggtggagcggtgaaatgcgtagagatcgggaagaacgccaagggcgaaggcactctgctaggcctgatttcgcgactgacactcagggacgagagccaggggagcgaatgggattagataccccagtagtcctggccgtaaacgatggataccaagccctgcgcgtatcgacccgggcagggctgtagctaacgcatgaagtatcccgcctggggagtacgctcgcaagagtgaaactcaaaggaattgacgggagcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccgcgaacccccctgagaggggggggtgccttcgggagcgcggacacaggtggtgcatggctgtcgtcagctcgtgtcgtaagatgttgggttcagtcccgcaacgagcgcaacccccgtctctagttgcccacaattcggcaccctagagagaccgccggtgttaagccggaggaaggtggggatgaggtcaagtcaacatgccccttttgccctgggcgacacacgtgctacaatggccgggacaaagagatgcgaccccgcaagggccagcctgacctcgtaaacccggcctcagttcggattgtaggctgcaacccgcctacatgaaggaggaatcgctagtaatcaccggtcagccatacggtggtgaatccgttcccgggctttgcacacaccgcccgtcacactatgggaatcggccatgccccaagtcgttaccccaacccgtagggagggggatgccaaaggcagggctggtgactaaagtgaagtcgtaacaaggtagccgtactggaaggtgtggctggatcacctccttc
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_024817_113 count=1; cluster_weight=1; cluster=RRNA16S_NC_024817_113; cluster_score=1.000000; cluster_center=True;
|
||||||
|
GTAATCGTGCTTCAAGCGCAAAGGAACCACACTATTCCATCTCGAACTAGCCTGTGAAAC
|
||||||
|
TTTGTAGCGAGGAACAAGGTATGGGGGACACCCCATGTAAACATTCCTTCAGTGCGATTT
|
||||||
|
T
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024817_113.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024817_113.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_024817_113 count=1; cluster_weight=1; cluster=RRNA16S_NC_024817_113; cluster_score=1.000000; cluster_center=True;
|
||||||
|
gtaatcgtgcttcaagcgcaaaggaaccacactattccatctcgaactagcctgtgaaactttgtagcgaggaacaaggtatgggggacaccccatgtaaacattccttcagtgcgatttt
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_024829_376 count=1; cluster_weight=1; cluster=RRNA16S_NC_024829_376; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AGGGTGCATAAGGATGTTATGCTCAGCTTGGAATACGATCATGAAGTTGAACGTTCCGGA
|
||||||
|
GATACCTAGAGGCATACCATCAGAGAAAGAACCCTGACCGATTGGGTAGATCAAGAAAAC
|
||||||
|
TGCGAATGCAGCTGCAACTGGTGCAGAGTAAGCAACAGCAATCCAAGGACGCATACCTAG
|
||||||
|
ACGGAAAGATAGTTCCCACTCACGACCCATGTAAGCACAGATTCCGATTAGGAAGTGACA
|
||||||
|
AAGGATTAGTAGGTAAGGCCCACCGTTGTAAAGCCACTCATCAAGGGAAGCAGCTTCCCA
|
||||||
|
GATTGGGTAGAAGTGCATACCGATTGCGTTACTCATAGGAATAACAGCACCAGAAATAAT
|
||||||
|
GTTGTTCCCGTAAAGAAGGGAACCAGAAACTGGCTCACGGATACCATCAATATCTACAGG
|
||||||
|
AGGAGCTGCAACGAATGCAATGATGAATACGGAGATAGCAGTCAATAGGCAAGGAATCAT
|
||||||
|
CAAAACACCAAACCAACCAATGTATAGGCGGTTCTCAGTACTAGTGATCCAATCACAGAA
|
||||||
|
ACGACCCCATAAGCTGGAGCTTTCACGTCTTTCTAAAATAGCAGTCATGATTAATTAAGT
|
||||||
|
TTTTACGAATGTAGAGATTTTCCCAAGCTTCCAAGAAAACTTGTTCTTTATAGTATACCA
|
||||||
|
CATCTAGAGGCCAACAAAGAAAAAAGAAAAATAAATAACAAGAAAAAATAAATATTAAAA
|
||||||
|
AATAAATTAATTTTGTGTGCTTTTTAGAATACCGCTGGTCGGACTCGAACCGACACGGGA
|
||||||
|
AGCCCACTACATTTTGAGTGTAGCGTGTCTACCAATTCCACCACAGCGGCATATTAGTAG
|
||||||
|
TATATCGGAAAGAATCCAGTCCTTCCAACTTTAATTTAAGTATGGATTGCCTGGTGATCC
|
||||||
|
AGGCAATCCATACTTAAATTAAAGTTGGAGTTTGAGAAGTGCTTAAACGAGCTAACTCAA
|
||||||
|
ATAAGGAATCACCAGCTATTCCTGCCAAGACAGTACTAATGACACAAACTAAAATACCAA
|
||||||
|
CCTCAAGAGGTTGGAGGATCTGTTGGGCCCATCCTCGAGGTGGGTACTGAAGAACCGAAA
|
||||||
|
GAGACATTTCTTCCGAAGACTTGACCAACATAATTTTAATAGCTAAAAAAACAATAAACT
|
||||||
|
GTTTGGTTTATTAGTTGGTTATTTCAGAAGAAAAATCTTAAGTTACTTTGGCATGTACAC
|
||||||
|
AATGAGAAACCAATTACCAGCTCCCTTTATATCTGGATAATTTACATAAATTAGGATTTT
|
||||||
|
AGGTAAGCCATGCACAATAGTTGACTATATATTCCTTGACTCTTTATTCTATGTAACTTT
|
||||||
|
ATGATTTAACACACTAATGATTTACTTAAAACAAAATACCAATCACTGTTGTACACTTTC
|
||||||
|
CAAACTAATTGAGGGTTGTAATTCGGAAAAGAGTCCAATAGATACAACTAGACAGCCTTT
|
||||||
|
TGAATGTAAACCCTCTTTTTAAGAGAATTACAAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_024829_376.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_024829_376 count=1; cluster_weight=1; cluster=RRNA16S_NC_024829_376; cluster_score=1.000000; cluster_center=True;
|
||||||
|
agggtgcataaggatgttatgctcagcttggaatacgatcatgaagttgaacgttccggagatacctagaggcataccatcagagaaagaaccctgaccgattgggtagatcaagaaaactgcgaatgcagctgcaactggtgcagagtaagcaacagcaatccaaggacgcatacctagacggaaagatagttcccactcacgacccatgtaagcacagattccgattaggaagtgacaaaggattagtaggtaaggcccaccgttgtaaagccactcatcaagggaagcagcttcccagattgggtagaagtgcataccgattgcgttactcataggaataacagcaccagaaataatgttgttcccgtaaagaagggaaccagaaactggctcacggataccatcaatatctacaggaggagctgcaacgaatgcaatgatgaatacggagatagcagtcaataggcaaggaatcatcaaaacaccaaaccaaccaatgtataggcggttctcagtactagtgatccaatcacagaaacgaccccataagctggagctttcacgtctttctaaaatagcagtcatgattaattaagtttttacgaatgtagagattttcccaagcttccaagaaaacttgttctttatagtataccacatctagaggccaacaaagaaaaaagaaaaataaataacaagaaaaaataaatattaaaaaataaattaattttgtgtgctttttagaataccgctggtcggactcgaaccgacacgggaagcccactacattttgagtgtagcgtgtctaccaattccaccacagcggcatattagtagtatatcggaaagaatccagtccttccaactttaatttaagtatggattgcctggtgatccaggcaatccatacttaaattaaagttggagtttgagaagtgcttaaacgagctaactcaaataaggaatcaccagctattcctgccaagacagtactaatgacacaaactaaaataccaacctcaagaggttggaggatctgttgggcccatcctcgaggtgggtactgaagaaccgaaagagacatttcttccgaagacttgaccaacataattttaatagctaaaaaaacaataaactgtttggtttattagttggttatttcagaagaaaaatcttaagttactttggcatgtacacaatgagaaaccaattaccagctccctttatatctggataatttacataaattaggattttaggtaagccatgcacaatagttgactatatattccttgactctttattctatgtaactttatgatttaacacactaatgatttacttaaaacaaaataccaatcactgttgtacactttccaaactaattgagggttgtaattcggaaaagagtccaatagatacaactagacagccttttgaatgtaaaccctctttttaagagaattacaat
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_025524_356 count=1; cluster_weight=1; cluster=RRNA16S_NC_025524_356; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAAGCTGGTGGCCTAGCCAGGTTGGTCCCATGGCAATCCATCCCGAACTTGCACATGAAA
|
||||||
|
CGGCCTGGGAGTGACAATACTTGTACCGAAGGGTACTGGAAAGATAACTTGTTGCCAGCA
|
||||||
|
TT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025524_356.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025524_356.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025524_356 count=1; cluster_weight=1; cluster=RRNA16S_NC_025524_356; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaagctggtggcctagccaggttggtcccatggcaatccatcccgaacttgcacatgaaacggcctgggagtgacaatacttgtaccgaagggtactggaaagataacttgttgccagcatt
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_025525_126 count=1; cluster_weight=1; cluster=RRNA16S_NC_025525_126; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TATCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
|
||||||
|
AGTCGAACGGAATTAAGTTTTACATTTTGAATCCTCAAAATGCGAGCTTAATTTAGTGGC
|
||||||
|
GGACGGGTGAGTAACGCGTAAGAACCTACCTTTAGGAGGGGGACAACAGCTGGAAACGGC
|
||||||
|
TGCTAATACCCCATATGCTGAGGAGTGAAATGGTGTAACAACCGCCTAAAGATGGGCTTG
|
||||||
|
CGTCTGATTAGCTTGTTGGTAAGGTAAAGGCTTACCAAGGCAACGATCAGTAGCTGGTCT
|
||||||
|
GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCA
|
||||||
|
GTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGATGAAG
|
||||||
|
GCCCGTGGGTCGTAAACTCCTTTTCTCAGAGAAGAATTTCTGACGGTATCTGAGGAATAA
|
||||||
|
GCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGA
|
||||||
|
ATGATTGGGCGTAAAGCGTTTGTAGGTGGTTTATTAAGTCTTCTGTCAAAGCTCAGGGCT
|
||||||
|
TAACCCTGTTTAGGCAGTAGAAACTAATAGGCTAGAGTACGGTAGGGGCAGAGGGAATTC
|
||||||
|
CCGGTGTAGCGGTGAAATGCGCAGATATCGGGAAGAACACCGATGGCGAAAGCACTCTGC
|
||||||
|
TGGGCCGAAACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCA
|
||||||
|
GTAGTCCTAGCCGTAAACGATGGATACTTAATGGTGGAAGGCGATATTCCCCTCGGGGAG
|
||||||
|
TATTAAATTTCACCATTGTAGCTAACGCGATAAGTATCCCGCCTGGGGAGTATGCTCGCA
|
||||||
|
AGAGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAAT
|
||||||
|
TCGATGCAACGCGAAGAACCTTACCAGGGCTTGACATGCCGTTAGTTCTCTTGAAAAAGA
|
||||||
|
GAAGTTCGCCCGTAAAAAGGCCGACGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTG
|
||||||
|
TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTTAGTTGTTTTTTA
|
||||||
|
TATCAAACTACCAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCA
|
||||||
|
TCATGCCCCTTATGCCCTGGGCTACACACGTGCTACAATGGCCGGGACAAAGAGATGCGA
|
||||||
|
CCCTGCGAAGGTAAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCAGGCTGCAACT
|
||||||
|
CGCCTGCATGAAGGCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATACGT
|
||||||
|
TCCCGGGCCTTGTACACACCGCCCGTCACACCATGGAAGCTGGCTATGCCCAAAGTCGTT
|
||||||
|
GCCCCAACTTTTTTAGAGGGGGATGCCTAAGGCAGAGCTAGTGACTGGGGTGAAGTCGTA
|
||||||
|
ACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025525_126.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025525_126 count=1; cluster_weight=1; cluster=RRNA16S_NC_025525_126; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tatcatggagagtttgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagtcgaacggaattaagttttacattttgaatcctcaaaatgcgagcttaatttagtggcggacgggtgagtaacgcgtaagaacctacctttaggagggggacaacagctggaaacggctgctaataccccatatgctgaggagtgaaatggtgtaacaaccgcctaaagatgggcttgcgtctgattagcttgttggtaaggtaaaggcttaccaaggcaacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggatgaaggcccgtgggtcgtaaactccttttctcagagaagaatttctgacggtatctgaggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgcaagcgttatccggaatgattgggcgtaaagcgtttgtaggtggtttattaagtcttctgtcaaagctcagggcttaaccctgtttaggcagtagaaactaataggctagagtacggtaggggcagagggaattcccggtgtagcggtgaaatgcgcagatatcgggaagaacaccgatggcgaaagcactctgctgggccgaaactgacactgagagacgaaagctaggggagcgaatgggattagataccccagtagtcctagccgtaaacgatggatacttaatggtggaaggcgatattcccctcggggagtattaaatttcaccattgtagctaacgcgataagtatcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccgttagttctcttgaaaaagagaagttcgcccgtaaaaaggccgacggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgttgttagttgttttttatatcaaactaccaagactgccggtgataagccggaggaaggtgaggatgacgtcaagtcatcatgccccttatgccctgggctacacacgtgctacaatggccgggacaaagagatgcgaccctgcgaaggtaagccaacctcaaaaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgctagtaatcgccggtcagccatacggcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccatggaagctggctatgcccaaagtcgttgccccaacttttttagagggggatgcctaaggcagagctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttt
|
60
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.align.fasta
Normal file
60
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.align.fasta
Normal file
@ -0,0 +1,60 @@
|
|||||||
|
>RRNA16S_NC_025526_91 count=1; cluster_weight=1; cluster=RRNA16S_NC_025526_91; cluster_score=1.000000; cluster_center=True;
|
||||||
|
CTGTTTATCATCGATGTATATTGAACTCTATACATACTCACATAAGCGTTCATTAAGAAA
|
||||||
|
TGAATCACTTTTGCAGATCTTTTACAGGTTTCCTTCGGCACCACCTTCGGTGGAAGCCTT
|
||||||
|
CCACCGTCGCCTCTTCACCTTCGGTGATCGCCAGAGGCGAAGGCGTCGCCGTCCACCAGA
|
||||||
|
GGTGGTGGGGAACACCAGAGGTGGTTGGTGGTGCGATAACCTTTGGTTACCACCAAAGGT
|
||||||
|
GGACACCTTCAGTGGTAGCGAGGCGAAGATTAAAGGTGGTGAGAATAGAGAAAAAAGGCA
|
||||||
|
CGAAGTGCTGACCCTCCACCAAAGGTGGTGGGGAAGGAATTCTTGACACGTCGTAAATAC
|
||||||
|
CTTTACCAACAAGTTTTTGTTTCTGACGTGGCTCAACATTATTGACTAAGAAAAACTTAG
|
||||||
|
TATAAGCTTGACAAATGAAGAAATAATTATTAGACTAAGGAAATAATTGTAAGCACTTTG
|
||||||
|
CATAATTTTGCGCTATTTTTTACACTATTGGGTTATACAATGGTGTGTTAATACTATAGT
|
||||||
|
ATATAATGTACATGGTGGATGCTTACTTCGGTTTGTACGAATTTTCCAGATCAGGTAGTG
|
||||||
|
TTAAAAAATTTAACTGATTTGCTATTATCTCTATTCCTTCCTTCCCGATCACCGACGATT
|
||||||
|
AGTACCAAAGGTGATCGCCTCCGGCGAACACCTATGGTGGTGAGCAAGAAAGCCAAAGGC
|
||||||
|
TATTAGCTCAGTTGGTTAGAGCGCGCCCCTGATAAGGGCGAGGTCGCTAGTTCAAATCTA
|
||||||
|
GTATAGCCTACCCAAGAAGCAAAGCTTCTAGAGCAAAGCTTCTAGAGCAAAGCCGTCGGA
|
||||||
|
ATGGAGTATACCCGAAAGGTACCCGGACATTGGTTCGGTAAGTAAAGTTTTCAAGCTGTG
|
||||||
|
CTTGATGGCTATGAATCGGTGTATGATGTTGAGGTTTGTCATAAGCAAAGCAAGAAGCCG
|
||||||
|
AGGCTTGAGACTTAGCGTCGCTACCCCCGAAGGTGTCCACCTTTGGTGGTGCTTTCGCCA
|
||||||
|
GAGGGAAACACGAAAATTGTTAAGGAAAATAAAATCTGGGGACTTAGCTCAGTTGGTAGA
|
||||||
|
GCGCTGTCCTTGCACGGCAGATGTCAGCGGTTCGAACCCGCTAGTCTCCACCATTGACAC
|
||||||
|
AGTGACACTGTGTTGGCACAAAACTTGACTTTTGGTGATGTTTTGTGTACTCTTTTTGTG
|
||||||
|
TTATGTATTCACAGCATTGACTTTGTCAATGACATAGGATTTGAAAAATATGAGACGTTA
|
||||||
|
GTTTTAAGAGACTCTCGTTGAAAGATTTTGAAAATCTTCGATGTAAGTCGAAGGATACAT
|
||||||
|
ACAATACATAGCGTACAAGGTCAAATAAAAATAGGTTTACGGCGGATACCTAGGCATCCA
|
||||||
|
GAGACGAAGAAGGGCGTGGCAACCGACGAGACACTTCGAGGAGCTGGAAACAAGCTATGA
|
||||||
|
GTCGAAGATTCCCTAATAGGGCAACCTCAAGAACTTCTTATTGAATTCATAGATAAGAAA
|
||||||
|
GAGACAACCCGGTGAATTGAAACATCTCAGTAGCCGGAGGAGAAGAAAGCAACAGCGATT
|
||||||
|
CCCTTAGTAGCGGCGAGCGAAGCGGGAACAGCCTAAACCCATTGAACGTCATGTTTCGTG
|
||||||
|
GGGGTCGTGGGAGGATATATGCATAGAATTTGGGTAGACGAAGCAGCTGATACCTGCACC
|
||||||
|
ATAGACGGTGATAGTCCGGTAGTTAAAACCTAAATAAAAGCAGAAATGAATTCAATTAAG
|
||||||
|
AATTGGTGATCAATATATTTAATCCCAAGTAGCATGGGGCACGTGAAATCCCGTGTGAAT
|
||||||
|
CAGCGAGGACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGCGAAATAGTACCG
|
||||||
|
TGAGGGAAAGGTGAAAGAGAACCCCTGAAGGGGAGTGAAATAGTATATGAAACCGTAATC
|
||||||
|
TGACAAGCAGTGGGAGGGTGAAGAGCCTGACCGCGTGCCTGTGGAAGAATGAACCGGCGA
|
||||||
|
CTTATAGGGAGTGGCTTGGTTAAGGACATTTATCCGAAGCCAAAGCGAAAGCAAGTTTTC
|
||||||
|
ATAGAGCGTTTTTGTCACTTCTTATGGACCCGAACCCGGGTGATCTAACCATGACCAGGA
|
||||||
|
TGAAACTTGGGTAACACCAAGTGAAGGTCCGAACTCATCGATGTTGAAAAATCGTGGGAT
|
||||||
|
GAGTTGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAAT
|
||||||
|
GTGTTGAGGCGCAGCGGTTGACGAAATAAAAGGGCTACTCGGGGGTAAAGCACTGTTTCG
|
||||||
|
GTGCGGGCTGCGAAAGCGGTACCAAATCGTGGCAAACTAAGAATACCGGGTATTGCTTCC
|
||||||
|
CGTCAACCAGTGAGACAGTGGGGGATAAGCTCCATTGTCAAGAGGGAAACAGCCCAGATC
|
||||||
|
ACCAGCTAAGGCCCCAAAATGACAGCTAAGTGGTAAAGGAGGTGAGAGTGCATAAACAAC
|
||||||
|
CAGGAGGTTTGCTTAGAAGCAGCCATCCTTTAAAGAGTGCGTAATAGCTCACTGGTGGAG
|
||||||
|
CGCTCTTGCGCCGAAAATTTATGGGACTAAGCTGTCTGCCGAAGCTGTGGGATGTTGAAA
|
||||||
|
AGCATGTTGCAAAATCTAAGACTTCCACCAAAGGTGGTGCGATCACCAAAGGTGTTCGCC
|
||||||
|
ACCGGCGAGTCGAAAGCACAGAGTGCTGACCCTCCACCAAAGGTGGTGTGGAAGGATTTG
|
||||||
|
AAAAATCTGAGACGGCAGTCGAAGGATTGTAAAAACAGTGTTTGTATCAGCATCGGTAGG
|
||||||
|
GGAGCGTTCCGCTCTAGGTTGAAGCATCTGTGTAAATCGGTGTGGACGAAGCGGAAGTGA
|
||||||
|
GAATGTCGGTTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGG
|
||||||
|
TTCCTTCACTAGGTTCGTCCATGGAGGGTGAGTCAGGTCCTAAGGCTAGGCCGAGAGGCG
|
||||||
|
TCGTCGATGGGAAGCAGGTTAATATTCCTGTACTACTTATGGTGTGTACCGAGGGACGGA
|
||||||
|
GTAGGCATCTATACACCAGAGTTGGATCTGGTGAGAGGCGTTCAAGGTGATGAGAGATAG
|
||||||
|
AATAAAAACTATTCTTGAGCTGAGTCGCGTTATGGCTTTACTCTTGACTGCCATCTTTTT
|
||||||
|
GGTGGTCGGATGAGGTTTATATGTCATGTCAAACTTCCAAGAAAAGCTCGAACTACTAAT
|
||||||
|
CAACCATAAAGTATCTGTACCCGAAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGG
|
||||||
|
GCGCGAGATAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGG
|
||||||
|
GTGCCACTTTTTAAAAGAAAGTGGTCGCAGTGAGCAGGCCCAGGCGACTGTTTACCAAAA
|
||||||
|
ACACAGGTCTCCGCTAAGTCGTAAGACAATGTATGGGGGCTGACGCCTGCCCGGTGCTGG
|
||||||
|
AAGGTAAAGGAAGTTGGTTATTCTTCGGGAGAAGCTGACGACCGAAGCCCCAGTGAACGG
|
||||||
|
CGGCCGTAACTATA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025526_91.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025526_91 count=1; cluster_weight=1; cluster=RRNA16S_NC_025526_91; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ctgtttatcatcgatgtatattgaactctatacatactcacataagcgttcattaagaaatgaatcacttttgcagatcttttacaggtttccttcggcaccaccttcggtggaagccttccaccgtcgcctcttcaccttcggtgatcgccagaggcgaaggcgtcgccgtccaccagaggtggtggggaacaccagaggtggttggtggtgcgataacctttggttaccaccaaaggtggacaccttcagtggtagcgaggcgaagattaaaggtggtgagaatagagaaaaaaggcacgaagtgctgaccctccaccaaaggtggtggggaaggaattcttgacacgtcgtaaatacctttaccaacaagtttttgtttctgacgtggctcaacattattgactaagaaaaacttagtataagcttgacaaatgaagaaataattattagactaaggaaataattgtaagcactttgcataattttgcgctattttttacactattgggttatacaatggtgtgttaatactatagtatataatgtacatggtggatgcttacttcggtttgtacgaattttccagatcaggtagtgttaaaaaatttaactgatttgctattatctctattccttccttcccgatcaccgacgattagtaccaaaggtgatcgcctccggcgaacacctatggtggtgagcaagaaagccaaaggctattagctcagttggttagagcgcgcccctgataagggcgaggtcgctagttcaaatctagtatagcctacccaagaagcaaagcttctagagcaaagcttctagagcaaagccgtcggaatggagtatacccgaaaggtacccggacattggttcggtaagtaaagttttcaagctgtgcttgatggctatgaatcggtgtatgatgttgaggtttgtcataagcaaagcaagaagccgaggcttgagacttagcgtcgctacccccgaaggtgtccacctttggtggtgctttcgccagagggaaacacgaaaattgttaaggaaaataaaatctggggacttagctcagttggtagagcgctgtccttgcacggcagatgtcagcggttcgaacccgctagtctccaccattgacacagtgacactgtgttggcacaaaacttgacttttggtgatgttttgtgtactctttttgtgttatgtattcacagcattgactttgtcaatgacataggatttgaaaaatatgagacgttagttttaagagactctcgttgaaagattttgaaaatcttcgatgtaagtcgaaggatacatacaatacatagcgtacaaggtcaaataaaaataggtttacggcggatacctaggcatccagagacgaagaagggcgtggcaaccgacgagacacttcgaggagctggaaacaagctatgagtcgaagattccctaatagggcaacctcaagaacttcttattgaattcatagataagaaagagacaacccggtgaattgaaacatctcagtagccggaggagaagaaagcaacagcgattcccttagtagcggcgagcgaagcgggaacagcctaaacccattgaacgtcatgtttcgtgggggtcgtgggaggatatatgcatagaatttgggtagacgaagcagctgatacctgcaccatagacggtgatagtccggtagttaaaacctaaataaaagcagaaatgaattcaattaagaattggtgatcaatatatttaatcccaagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaagagaacccctgaaggggagtgaaatagtatatgaaaccgtaatctgacaagcagtgggagggtgaagagcctgaccgcgtgcctgtggaagaatgaaccggcgacttatagggagtggcttggttaaggacatttatccgaagccaaagcgaaagcaagttttcatagagcgtttttgtcacttcttatggacccgaacccgggtgatctaaccatgaccaggatgaaacttgggtaacaccaagtgaaggtccgaactcatcgatgttgaaaaatcgtgggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggttgacgaaataaaagggctactcgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaataccgggtattgcttcccgtcaaccagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagctaaggccccaaaatgacagctaagtggtaaaggaggtgagagtgcataaacaaccaggaggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgctcttgcgccgaaaatttatgggactaagctgtctgccgaagctgtgggatgttgaaaagcatgttgcaaaatctaagacttccaccaaaggtggtgcgatcaccaaaggtgttcgccaccggcgagtcgaaagcacagagtgctgaccctccaccaaaggtggtgtggaaggatttgaaaaatctgagacggcagtcgaaggattgtaaaaacagtgtttgtatcagcatcggtaggggagcgttccgctctaggttgaagcatctgtgtaaatcggtgtggacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttccttcactaggttcgtccatggagggtgagtcaggtcctaaggctaggccgagaggcgtcgtcgatgggaagcaggttaatattcctgtactacttatggtgtgtaccgagggacggagtaggcatctatacaccagagttggatctggtgagaggcgttcaaggtgatgagagatagaataaaaactattcttgagctgagtcgcgttatggctttactcttgactgccatctttttggtggtcggatgaggtttatatgtcatgtcaaacttccaagaaaagctcgaactactaatcaaccataaagtatctgtacccgaaaccgacacaggtaggtaggtagagtataccaaggggcgcgagataactctctctaaggaactcggcaaaatagccccgtaacttcgggagaaggggtgccactttttaaaagaaagtggtcgcagtgagcaggcccaggcgactgtttaccaaaaacacaggtctccgctaagtcgtaagacaatgtatgggggctgacgcctgcccggtgctggaaggtaaaggaagttggttattcttcgggagaagctgacgaccgaagccccagtgaacggcggccgtaactata
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_025527_342 count=1; cluster_weight=1; cluster=RRNA16S_NC_025527_342; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAACACATGCA
|
||||||
|
AGTCGAACGAAAAACAATTTTAGTTATAAATTTATTTATAACTAAAGTTTTTAGTGGCGG
|
||||||
|
ACGGGTGAGTAACACGTAAGAATCTACCTTTAGGAGGGGGACAAAATTTGAATAAATTTA
|
||||||
|
AAAGGTTTATTCGCTGGAAACAGTATGAATACCCCATATGCTGAGGAGTGAAATAATATT
|
||||||
|
TTTGCCTAGAGATGAGCTTGCGTCTGATTAGCTTGTTGGTGGGGTAATGGCCTACCAAGG
|
||||||
|
CCATGATCAGTAGTTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA
|
||||||
|
GACTCCTGCGGGAGGCAGCAGTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCA
|
||||||
|
ATACCGCGTGGAGGATTGACAGCTTATGGGCCGTAAACTCCTTTTCTCAGAAAAGAAAAA
|
||||||
|
ATTGACGGTATCTGAGGAATAAGCATCGGCTAATTCTGTGCCAGCAGCCGCGGTAAGACA
|
||||||
|
GGAGATGCAAGTGTTATCCGGAATGATTGGGCGTAAAGGGTCTGTAGGTGGTTTGAAAAG
|
||||||
|
TCTGTTGTTAAATACTAGGGCTTAACCCTGGTCAGGCAATAGAAACTATTAGACTAGAGT
|
||||||
|
ACGGTAGAGGCAGAGGGAATTTTCGGTGGAGTGGTGAAATGCGTAGATCTCGAAAAGAAC
|
||||||
|
ACCAATGGCGAAGGCACTCTGCTGGGCCGATACTGACATTGAGAGACGAAAGCTAGGGGA
|
||||||
|
GCAAAAGGGATTAGATACCCCTGTAGTCCTAGCTGTAAACGATGGATACTAAGTGTTGGG
|
||||||
|
TAATAATACTACTCAGTACTGTAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTATGCTC
|
||||||
|
GCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTT
|
||||||
|
AATCTGATGCAACGCGAAGAACCTTACCAGAACTTGACATCCCATTTAGTAAGTCGAAAG
|
||||||
|
ACATACTTTTCTCTTGTAGAAGATGGTGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGT
|
||||||
|
CGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTTAATTGCAATTTAT
|
||||||
|
GTGGAAATTAGAAAGACTGCCGGTGATAAACCGGAGGAAGGTGAGGACGACGTCAAGTCG
|
||||||
|
GCATGCCCCTTATGTTCTGGGCGACACACGTGCTACAATGGCCGAGACAATGGGATGCTA
|
||||||
|
CTCGTGAGATTAGGCAAATCTCAAAAACTCGGTCTCAATTCGGATTGTAGGCTGAAACTC
|
||||||
|
GCCTACATGAAGTTGGAATCGCTAGTAATCGCTGGTCAGCCATACAGCGGTGAATACGTT
|
||||||
|
CTCGGGCCTTGTACACACCGCCCGTCACACTACCGAAATTGGTTTGGTCCAAAGTCGTGA
|
||||||
|
CTTTAACTATATACTGTTAAATGTATTAGAAGAGAGCGCCTAAGGCAGGGCTGGTAACGA
|
||||||
|
GAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGATCACCTCCTTT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025527_342.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025527_342 count=1; cluster_weight=1; cluster=RRNA16S_NC_025527_342; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tttcatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgaacgaaaaacaattttagttataaatttatttataactaaagtttttagtggcggacgggtgagtaacacgtaagaatctacctttaggagggggacaaaatttgaataaatttaaaaggtttattcgctggaaacagtatgaataccccatatgctgaggagtgaaataatatttttgcctagagatgagcttgcgtctgattagcttgttggtggggtaatggcctaccaaggccatgatcagtagttggtctgagaggatgatcagccacactgggactgagacacggcccagactcctgcgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtggaggattgacagcttatgggccgtaaactccttttctcagaaaagaaaaaattgacggtatctgaggaataagcatcggctaattctgtgccagcagccgcggtaagacaggagatgcaagtgttatccggaatgattgggcgtaaagggtctgtaggtggtttgaaaagtctgttgttaaatactagggcttaaccctggtcaggcaatagaaactattagactagagtacggtagaggcagagggaattttcggtggagtggtgaaatgcgtagatctcgaaaagaacaccaatggcgaaggcactctgctgggccgatactgacattgagagacgaaagctaggggagcaaaagggattagatacccctgtagtcctagctgtaaacgatggatactaagtgttgggtaataatactactcagtactgtagctaacgcgtgaagtatcccgcctggggagtatgctcgcaagggtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaatctgatgcaacgcgaagaaccttaccagaacttgacatcccatttagtaagtcgaaagacatacttttctcttgtagaagatggtgacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtttttaattgcaatttatgtggaaattagaaagactgccggtgataaaccggaggaaggtgaggacgacgtcaagtcggcatgccccttatgttctgggcgacacacgtgctacaatggccgagacaatgggatgctactcgtgagattaggcaaatctcaaaaactcggtctcaattcggattgtaggctgaaactcgcctacatgaagttggaatcgctagtaatcgctggtcagccatacagcggtgaatacgttctcgggccttgtacacaccgcccgtcacactaccgaaattggtttggtccaaagtcgtgactttaactatatactgttaaatgtattagaagagagcgcctaaggcagggctggtaacgagagtgaagtcgtaacaaggtagccgtactggaaggtgtggctggatcacctccttt
|
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.align.fasta
Normal file
27
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.align.fasta
Normal file
@ -0,0 +1,27 @@
|
|||||||
|
>RRNA16S_NC_025528_354 count=1; cluster_weight=1; cluster=RRNA16S_NC_025528_354; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAAATAGATGCTTGCCCAATTAGTCTGTAATCATTTAAAGATGGATTATAGACTCATGCT
|
||||||
|
TATCCAGTTCTACTGCAACTGTTTTTTTTATTAACTTTAATAGTGTTCAGTATTCAATCA
|
||||||
|
AAAAATTGTCACTGTTGTTTTTGTGAAATAAAAAGATAAGAAAAAGCAGACACTTCGTTA
|
||||||
|
ATAGTAATAGAGCTAGTTCGAATCTACCTTTCACCTAACACTTAGGTGAAAGTAAAGGGG
|
||||||
|
GTTTTAACATAATTTAAATTGGATTCGCTAACTTTGCTTTTACCTTGTTTTTACTAAGCT
|
||||||
|
TCAAACCTTGCTAAAAACTTGTCGCTAGGTAATCAGTTATAAGTAGACAAGGTTAGCAAG
|
||||||
|
TTAAATACTGTTTTCAGCAAAAAGATTGGTGCTCAAAACTGACGAATGTTCTAACTTTGT
|
||||||
|
TTCTACTTCTAACCTAGCGTCTGCTAAAAGATTGTCGCGTCTACTTCGTTGGAAAAACTT
|
||||||
|
GTCTAACTGAGCCTGCGACTAGTCTGGCGCTGGCTCAGTAAAGGTAATAACCTTAATACA
|
||||||
|
TTGTAGATTTATAAAGGTGAGCAAACAAAAGTAAAAACAAAATAGACAGCTTCGTAATCT
|
||||||
|
ATGGGCGTAGTATGAAATAAAAATCTATGACTAAACAAAACACATTCAAAAGTATTCAAG
|
||||||
|
TGGAATCTATTAGAATTGGATTAGCTTCGCCGGATTGTATTAGAAAATGGGCTGAAAGAA
|
||||||
|
CACTACCAAATGGAAAAATTATTGGAAAAGTTACTAGTCGAGAAACAGTAAATTATAAAA
|
||||||
|
CATTTAAACCTGAAAAAGATGGACTATTCTGTGAACGAATTTTTGGTCCTGTTACAAATC
|
||||||
|
TTGAATGTTCTTGTGGGCGGAAAAAAACTGAACCCGAACAGCAATTTTGTACGGAATGCG
|
||||||
|
ATGTAGAATTTACAACTTCCAGAGTAAGACGATATCGTCTTGGGTATATTGAATTAATTT
|
||||||
|
CCCCGGTTGTACATATTTGGTATTTAAAAGGTAGATTAAGTTATATATCTATTTTATTAG
|
||||||
|
ACATGCGTCGAAAAAATGTTGAAGCTATTACTTATTGTACAAGCATTATAGATAATATGT
|
||||||
|
ATGATGAGACGGAAAAATCTATTCACAGCGAAACAGACAATTCAAAAAAAATTTTAAAAA
|
||||||
|
AACAACTACAAAAAACATTTTTAAATAATTATTATACGGTTTCGCAAACTTGTTCCTGGA
|
||||||
|
AAACACAATCTGATTTAGATAAATTTTCTTGCTATATGACTTGTTTGCCACAATGTGAAG
|
||||||
|
ATATTCCTATACCTAGTTATTCTAATCGAATTAATAATAAATTTATCTTTTCTAATAACG
|
||||||
|
TTTATTTAAATACCACACAATTGAGTACCGTTTTAACGGGTCCAGAAGCAATCCGTTATT
|
||||||
|
TCCTTGCAAATTTAGATTTACAACTTTTAGATAGACAAATTAAAGTTGAATTATTTGAAC
|
||||||
|
TAAACGAAGAAATTCACGCTTTTGAAAATATAGGGTTTCTTTTTTTTGATGAACGAAGAC
|
||||||
|
TATTACAAAAACTACTCTATATTCGATCAAAAAAGTTACGTCGTTTAAAATTAGTA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025528_354.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025528_354 count=1; cluster_weight=1; cluster=RRNA16S_NC_025528_354; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaaatagatgcttgcccaattagtctgtaatcatttaaagatggattatagactcatgcttatccagttctactgcaactgttttttttattaactttaatagtgttcagtattcaatcaaaaaattgtcactgttgtttttgtgaaataaaaagataagaaaaagcagacacttcgttaatagtaatagagctagttcgaatctacctttcacctaacacttaggtgaaagtaaagggggttttaacataatttaaattggattcgctaactttgcttttaccttgtttttactaagcttcaaaccttgctaaaaacttgtcgctaggtaatcagttataagtagacaaggttagcaagttaaatactgttttcagcaaaaagattggtgctcaaaactgacgaatgttctaactttgtttctacttctaacctagcgtctgctaaaagattgtcgcgtctacttcgttggaaaaacttgtctaactgagcctgcgactagtctggcgctggctcagtaaaggtaataaccttaatacattgtagatttataaaggtgagcaaacaaaagtaaaaacaaaatagacagcttcgtaatctatgggcgtagtatgaaataaaaatctatgactaaacaaaacacattcaaaagtattcaagtggaatctattagaattggattagcttcgccggattgtattagaaaatgggctgaaagaacactaccaaatggaaaaattattggaaaagttactagtcgagaaacagtaaattataaaacatttaaacctgaaaaagatggactattctgtgaacgaatttttggtcctgttacaaatcttgaatgttcttgtgggcggaaaaaaactgaacccgaacagcaattttgtacggaatgcgatgtagaatttacaacttccagagtaagacgatatcgtcttgggtatattgaattaatttccccggttgtacatatttggtatttaaaaggtagattaagttatatatctattttattagacatgcgtcgaaaaaatgttgaagctattacttattgtacaagcattatagataatatgtatgatgagacggaaaaatctattcacagcgaaacagacaattcaaaaaaaattttaaaaaaacaactacaaaaaacatttttaaataattattatacggtttcgcaaacttgttcctggaaaacacaatctgatttagataaattttcttgctatatgacttgtttgccacaatgtgaagatattcctatacctagttattctaatcgaattaataataaatttatcttttctaataacgtttatttaaataccacacaattgagtaccgttttaacgggtccagaagcaatccgttatttccttgcaaatttagatttacaacttttagatagacaaattaaagttgaattatttgaactaaacgaagaaattcacgcttttgaaaatatagggtttcttttttttgatgaacgaagactattacaaaaactactctatattcgatcaaaaaagttacgtcgtttaaaattagta
|
32
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.align.fasta
Normal file
32
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.align.fasta
Normal file
@ -0,0 +1,32 @@
|
|||||||
|
>RRNA16S_NC_025529_121 count=1; cluster_weight=1; cluster=RRNA16S_NC_025529_121; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCTCAT
|
||||||
|
TACCAGCCCTGCCTTAGGCGCTCTCGTCCCTTACGGGTTAGAGTTACGACTTTGGGCCAA
|
||||||
|
GCCGACTCTGGTAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGTATTCACCGCTGT
|
||||||
|
ATGGCTGACCAGCGATTACTAGCGATTCCGACTTCATGCAGGCGAGTTGCAGCCTGCAAT
|
||||||
|
CCGAACTGAGATTAGGTTTTTGAGGTTAGCTTGCTCTCGCGAGGTAGCATCTCATTGTCC
|
||||||
|
TAACCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGCTGACTTGACGTCATCC
|
||||||
|
TCACCTTCCTCCGGCTTATCACCGGCAGTCTTTCTAGTTTCCTTGACATATCGTAGTCTT
|
||||||
|
TACCAAAGTGTAGGTAAAGACCAAAGGGCCAACGGTAATCAAGCGAAGCTTGATAAACCT
|
||||||
|
GAGGCCGTAGCCTGGCTTTAATAAGCGAAGCTTATTAAAACTTGATATTGTTCTTCGAAC
|
||||||
|
AATATTTAGGAACCTAGGAAGAAGACTTCCATCCTTACCATGTCCGGTAAGGACAATGGC
|
||||||
|
GAAGTGGAAGATCCTAGTGTGTGCAAGCACACACTTTGGACTTGTATTCTTCCCATGGGG
|
||||||
|
CTCCCAGGTATTTATACTTAGAAAAGCAACTAAAAACAAGGGTTGCGCTCGTTGCGGGAC
|
||||||
|
TTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCACCACCTGTGTCCACCTCT
|
||||||
|
AAAAACCCAAAAGGGTTCTAGTAAAAACCTCTTTTTCAAGAGATTAAATGGCATGTCAAG
|
||||||
|
CCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGG
|
||||||
|
CCCCCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCATACTCCCCAGGCGGGATACTTCA
|
||||||
|
CGCGTTAGCTACAGTACTGGACGTTTTGAGTCGCACAGCACTTAGTATCCATCGTTTACG
|
||||||
|
GCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTGAGTGTCA
|
||||||
|
GTTTCGGCCCAGCAGAGTGCTTTCGCCATTGGTGTTCTTCCCGATCTCTACGCATTTCAC
|
||||||
|
CGCTACACCGGGAATTCCCTCTGCCCCTACCGTACTCAAGCTCATTAGTTTCTACTGCCG
|
||||||
|
ACTCAGGGTTAAGCCCTGATCTTTAACAGTAGACTTAATAAACCACCTACAGACGCTTTA
|
||||||
|
CGCCCAATCATTCCGGATAACGCTTGCATCCTCCGTCTTACCGCGGCTGCTGGCACGGAG
|
||||||
|
TTAGCCGATGCTTATTCCTCAGATACCGTCAGAACTTCTTCTCTGAGAAAAGGAGTTTAC
|
||||||
|
GACCCACAGGCTGTCATCCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGA
|
||||||
|
AAATTCCTCACTGCTGCCTTCCGTAGAAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTG
|
||||||
|
ATCATCCTCTCAGACCAGCTACTGATCGTTGCCTTGGTAGGCAATTACCCCACCAACCAG
|
||||||
|
CTAATCAGACGCAAGCCCATCTTTAGGCAGAATACTATTCCTTTTACTCCTCAGCTTATG
|
||||||
|
GGGTATTAGCAACCGTTTCCAGTTGTTGTCCCCCTCCTAAAGGTAGGTTCTTACGCGTTA
|
||||||
|
CTCACCCGTCCGCCACTAAGAATTTAATTTTTTTAAACCTAAGCCTAAAAAAATTAAACC
|
||||||
|
TCCGTTCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCAAAC
|
||||||
|
TCTCCATGAAA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025529_121.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025529_121 count=1; cluster_weight=1; cluster=RRNA16S_NC_025529_121; cluster_score=1.000000; cluster_center=True;
|
||||||
|
taaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactctcattaccagccctgccttaggcgctctcgtcccttacgggttagagttacgactttgggccaagccgactctggtagtgtgacgggcggtgtgtacaaggcccgggaacgtattcaccgctgtatggctgaccagcgattactagcgattccgacttcatgcaggcgagttgcagcctgcaatccgaactgagattaggtttttgaggttagcttgctctcgcgaggtagcatctcattgtcctaaccattgtagcacgtgtgtcgcccagggcataaggggcatgctgacttgacgtcatcctcaccttcctccggcttatcaccggcagtctttctagtttccttgacatatcgtagtctttaccaaagtgtaggtaaagaccaaagggccaacggtaatcaagcgaagcttgataaacctgaggccgtagcctggctttaataagcgaagcttattaaaacttgatattgttcttcgaacaatatttaggaacctaggaagaagacttccatccttaccatgtccggtaaggacaatggcgaagtggaagatcctagtgtgtgcaagcacacactttggacttgtattcttcccatggggctcccaggtatttatacttagaaaagcaactaaaaacaagggttgcgctcgttgcgggacttaacccaacatctcacgacacgagctgacgacagccatgcaccacctgtgtccacctctaaaaacccaaaagggttctagtaaaaacctctttttcaagagattaaatggcatgtcaagccctggtaaggttcttcgcgttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcactcttgcgagcatactccccaggcgggatacttcacgcgttagctacagtactggacgttttgagtcgcacagcacttagtatccatcgtttacggctaggactactggggtatctaatcccattcgctcccctagctttcgtctctgagtgtcagtttcggcccagcagagtgctttcgccattggtgttcttcccgatctctacgcatttcaccgctacaccgggaattccctctgcccctaccgtactcaagctcattagtttctactgccgactcagggttaagccctgatctttaacagtagacttaataaaccacctacagacgctttacgcccaatcattccggataacgcttgcatcctccgtcttaccgcggctgctggcacggagttagccgatgcttattcctcagataccgtcagaacttcttctctgagaaaaggagtttacgacccacaggctgtcatcctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattcctcactgctgccttccgtagaagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcagaccagctactgatcgttgccttggtaggcaattaccccaccaaccagctaatcagacgcaagcccatctttaggcagaatactattccttttactcctcagcttatggggtattagcaaccgtttccagttgttgtccccctcctaaaggtaggttcttacgcgttactcacccgtccgccactaagaatttaatttttttaaacctaagcctaaaaaaattaaacctccgttcgacttgcatgtgttaagcatgccgccagcgttcatcctgagccaggatcaaactctccatgaaa
|
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.align.fasta
Normal file
26
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.align.fasta
Normal file
@ -0,0 +1,26 @@
|
|||||||
|
>RRNA16S_NC_025531_364 count=1; cluster_weight=1; cluster=RRNA16S_NC_025531_364; cluster_score=1.000000; cluster_center=True;
|
||||||
|
AAAGTATCCTCATAAAAAATTACTTCTCGAAAAAAAGGGCCTATTTAATTTTTTTAAATG
|
||||||
|
TTTTAAGAGAAATTTAGTATATTATAGTTATATATTTATAATAAAAAAATTAAATATTGC
|
||||||
|
CAGGAACCAGACTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAG
|
||||||
|
CTATCCCGGCTATTTTTATTAATTAAAATAATAACATATTTTTTAGCTTGATGACAAGAT
|
||||||
|
TAAATTTCTATTTTTTTTATTATTAATTTAATATTTATTTATTAGAACTTTTTATGTTAA
|
||||||
|
ATATAATTCGCCTAACTTTTGCAATATGTGTTATCTTATTAATTGTTCCACAAACACAAA
|
||||||
|
CAGAAAATGTATTATTACGAATTTTTTATGAAACGAGAATTTTTAAAAATTATGGTCAAA
|
||||||
|
CAAAAAAAGTCTTAAATTTCGTCACCTGGATTTGTATCTTTATTTTCTTATTACTTATAT
|
||||||
|
TGACTAATATTTTCTATTAAAACCTATAGAAAACACTTTAGTAAAAGAGGATAAAAGGGG
|
||||||
|
GTCTGTGTTATTCATTTTAATTTTAAATTTTTGCTATTAGTGGTTAAAAACTTAAAAAAT
|
||||||
|
AAATTATATTTTTTAAGTTTTAGGGATTCTAATAAGTAATTTTAGTTTAAAAAATTAGTA
|
||||||
|
GGATACTGAAAATAAACGAAGCTTGTTTAAATAATTTTTTTTTAGATTAATAGCTTTTCT
|
||||||
|
TTATATCCATCAGATTATACGTCAATTTGGCTCCAAACAAAGTTATGTCTTAGTATGTCT
|
||||||
|
TAAATTGAATTCGAGACGTGTCCCTTATAAAAATTAATCAAAACTTTTAAAAAAGTTTTT
|
||||||
|
AATTTATTGTACAAACGTTGAGACAAAGTGTTGTTTTACGAGTATAGCTCGTAAAACAAA
|
||||||
|
AATAAAAGACGCACAACTCTATTAGATATCTAAAAAAATATTTAAAATTTGTAAAACTAA
|
||||||
|
CTTGTAAAGCCAAGATTACATTTTTAATAAAACCATATAAAAAAACTTACCTTAGATATT
|
||||||
|
TTGGAGACAGCGCTAAAGAAACTTAAATAAACCTAAATTTAGAATAAAACAAAATATAAA
|
||||||
|
CTTGGGTTTCAGCTTAAATTTTAAAGAAGATTTCTTTTATTTTAAATTTTCCTTAAAACT
|
||||||
|
TTAGAAATTAAAAAAAATAAAGAAGTTTAACTTACTCTTTAAAATAACAGTAGTTTAAGA
|
||||||
|
AAGTTATAGCACACCTAAAAAAAAAACAACTGGGGTGGAAGGATTCGAACCTCCGAATGG
|
||||||
|
CGGTACCAAAAACCGCTGCCTTACCACTTGGCGACACCCCATTAAATATAAGATTTATAT
|
||||||
|
ATTAAGTATAACATTACTGAAAGTTTTTATGTCAACTCCATTTTTTATTTTACTATTTTC
|
||||||
|
AGACTATATTAGCCACTAAACTAATAACTTGTTTTTTAAACAGCTTAAATAAAAAATAAA
|
||||||
|
ATTAAAGTTTAGCCTTGCTTGAACACTATTTAAAAAGCTGGTCTGGAGACACGTTGTAT
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025531_364.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025531_364 count=1; cluster_weight=1; cluster=RRNA16S_NC_025531_364; cluster_score=1.000000; cluster_center=True;
|
||||||
|
aaagtatcctcataaaaaattacttctcgaaaaaaagggcctatttaatttttttaaatgttttaagagaaatttagtatattatagttatatatttataataaaaaaattaaatattgccaggaaccagacttgaactggtgacacgaggattttcagtcctctgctctaccaactgagctatcccggctatttttattaattaaaataataacatattttttagcttgatgacaagattaaatttctattttttttattattaatttaatatttatttattagaactttttatgttaaatataattcgcctaacttttgcaatatgtgttatcttattaattgttccacaaacacaaacagaaaatgtattattacgaattttttatgaaacgagaatttttaaaaattatggtcaaacaaaaaaagtcttaaatttcgtcacctggatttgtatctttattttcttattacttatattgactaatattttctattaaaacctatagaaaacactttagtaaaagaggataaaagggggtctgtgttattcattttaattttaaatttttgctattagtggttaaaaacttaaaaaataaattatattttttaagttttagggattctaataagtaattttagtttaaaaaattagtaggatactgaaaataaacgaagcttgtttaaataatttttttttagattaatagcttttctttatatccatcagattatacgtcaatttggctccaaacaaagttatgtcttagtatgtcttaaattgaattcgagacgtgtcccttataaaaattaatcaaaacttttaaaaaagtttttaatttattgtacaaacgttgagacaaagtgttgttttacgagtatagctcgtaaaacaaaaataaaagacgcacaactctattagatatctaaaaaaatatttaaaatttgtaaaactaacttgtaaagccaagattacatttttaataaaaccatataaaaaaacttaccttagatattttggagacagcgctaaagaaacttaaataaacctaaatttagaataaaacaaaatataaacttgggtttcagcttaaattttaaagaagatttcttttattttaaattttccttaaaactttagaaattaaaaaaaataaagaagtttaacttactctttaaaataacagtagtttaagaaagttatagcacacctaaaaaaaaaacaactggggtggaaggattcgaacctccgaatggcggtaccaaaaaccgctgccttaccacttggcgacaccccattaaatataagatttatatattaagtataacattactgaaagtttttatgtcaactccattttttattttactattttcagactatattagccactaaactaataacttgttttttaaacagcttaaataaaaaataaaattaaagtttagccttgcttgaacactatttaaaaagctggtctggagacacgttgtat
|
28
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.align.fasta
Normal file
28
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.align.fasta
Normal file
@ -0,0 +1,28 @@
|
|||||||
|
>RRNA16S_NC_025533_343 count=1; cluster_weight=1; cluster=RRNA16S_NC_025533_343; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTCATGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCTTAACACATGCA
|
||||||
|
AGTCGAACGAAAGTAATTTTTTTAAAGGTAACTTTAAAAAAATTACTTTAGTGGCGGACG
|
||||||
|
GGTGAAGAACACGTAAGAACCTACCTTTAGGTGGGGGACAACAACTGGAAACGGTTGCTA
|
||||||
|
ATACCCCATATGCTGAGGAGTAAAAGAGTTTATTCTCGCCTAAAGATGGGCTTGCGTCTG
|
||||||
|
ATTAGCTTGTTGGTGAGGTAAAAGCTCACCAAGGCAACGATCAGTAGCTGGTCTGAGAGG
|
||||||
|
ATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGG
|
||||||
|
AATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGGAGGATGACAGCCCGT
|
||||||
|
GGGTCGTAAACTCCTTTTCTCAGAAAAGAAAAAATGACGGTATCTGAGGAATAAGCATCG
|
||||||
|
GCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATGATT
|
||||||
|
GGGCGTAAAGCGTTTTAAGGTGGTTTGGTAAGTCTACTGTTAAATATCAGGGCTTAACCC
|
||||||
|
TGAACAGGCAGTGGAAACTAGCAAGCTTGAGTACGGTAGGGGCAAAGGGAATTCCCGGTG
|
||||||
|
TAGCGGTGAAATGCGTAGATATCGGGAAGAACACCAAAGGCGAAAGCACTTTGCTGGGCC
|
||||||
|
GAAACTGACACTGATAGACGAAAGCTAGGGGAGCAAATGGGATTAGATACCCCAGTAGTC
|
||||||
|
CTAGCCGTAAACGATGGATACTAAGTGCTGTGCGATTCAAAACGTCCAGTGCTGTAGCTA
|
||||||
|
ACGCGTGAAGTATCCCGCCTGGGGAGTATGCTCGCAAGAGTGAAACTCAAAGGAATTGAC
|
||||||
|
GGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTAC
|
||||||
|
CAGGGCTTGACATGCCACTTTTTCTTTTGAAAGAGAGAATTTTTTTGGTGGACACAGGTG
|
||||||
|
GTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCA
|
||||||
|
ACCCTTGTTTTTAGTTGCACTTGAATAAAATTTTATTTTTACCAAGTGGTTTCTTTTTTC
|
||||||
|
TGTATATTTTTTTTATACAAAAAAAATATACAGAAAAGTAATTAAGAAAATAAAAAATTT
|
||||||
|
AATTTTTTATTATAAAACTAAAAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGA
|
||||||
|
CGTCAAGTCAGCATGCCCCTTATGTCCTGGGCTACACACGTGCTACAATGGCCGGGACAA
|
||||||
|
TGAGATGCAACCCCGGAAGGGTGAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCA
|
||||||
|
GGCTGCAACTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCG
|
||||||
|
GTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGGGAGCCGGCTTAGCC
|
||||||
|
CAAAGTCGTTACCCTAACCTTTTTGGAGGGGGATGCCTAAGGCAGAGCTGGTGACTGGGG
|
||||||
|
TGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTA
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025533_343.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025533_343 count=1; cluster_weight=1; cluster=RRNA16S_NC_025533_343; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tttcatggagagtttgatcctggctcaggatgaacgctggcggtatgcttaacacatgcaagtcgaacgaaagtaatttttttaaaggtaactttaaaaaaattactttagtggcggacgggtgaagaacacgtaagaacctacctttaggtgggggacaacaactggaaacggttgctaataccccatatgctgaggagtaaaagagtttattctcgcctaaagatgggcttgcgtctgattagcttgttggtgaggtaaaagctcaccaaggcaacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaataccgcgtggaggatgacagcccgtgggtcgtaaactccttttctcagaaaagaaaaaatgacggtatctgaggaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcaagcgttatccggaatgattgggcgtaaagcgttttaaggtggtttggtaagtctactgttaaatatcagggcttaaccctgaacaggcagtggaaactagcaagcttgagtacggtaggggcaaagggaattcccggtgtagcggtgaaatgcgtagatatcgggaagaacaccaaaggcgaaagcactttgctgggccgaaactgacactgatagacgaaagctaggggagcaaatgggattagataccccagtagtcctagccgtaaacgatggatactaagtgctgtgcgattcaaaacgtccagtgctgtagctaacgcgtgaagtatcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggggcccgcacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggcttgacatgccactttttcttttgaaagagagaatttttttggtggacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccttgtttttagttgcacttgaataaaattttatttttaccaagtggtttcttttttctgtatattttttttatacaaaaaaaatatacagaaaagtaattaagaaaataaaaaatttaattttttattataaaactaaaaagactgccggtgataagccggaggaaggtgaggatgacgtcaagtcagcatgccccttatgtcctgggctacacacgtgctacaatggccgggacaatgagatgcaaccccggaagggtgagccaacctcaaaaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagtcggaatcgctagtaatcgccggtcagccatacggcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccacgggagccggcttagcccaaagtcgttaccctaacctttttggagggggatgcctaaggcagagctggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctta
|
2805
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.align.fasta
Normal file
2805
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.align.fasta
Normal file
File diff suppressed because it is too large
Load Diff
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025534_93.fasta
Normal file
File diff suppressed because one or more lines are too long
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_025535_351 count=1; cluster_weight=1; cluster=RRNA16S_NC_025535_351; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTTTTGGTGTCTTTGCTAGTATGGACCCACACCAATCCATCTCGAACTTGGTTGTGAAAC
|
||||||
|
ATACTAGGAGTGACAATACTTAAGCCGTGAGGCTTTGGAAAGATAGCTTGATGCCAGAAA
|
||||||
|
A
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025535_351.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025535_351.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025535_351 count=1; cluster_weight=1; cluster=RRNA16S_NC_025535_351; cluster_score=1.000000; cluster_center=True;
|
||||||
|
tttttggtgtctttgctagtatggacccacaccaatccatctcgaacttggttgtgaaacatactaggagtgacaatacttaagccgtgaggctttggaaagatagcttgatgccagaaaa
|
@ -0,0 +1,4 @@
|
|||||||
|
>RRNA16S_NC_025536_334 count=1; cluster_weight=1; cluster=RRNA16S_NC_025536_334; cluster_score=1.000000; cluster_center=True;
|
||||||
|
TTCTAAGTAAACTAAGTTAAAAAAATAAAAATTTATTAAAAGCCTTAGTGGTGAAATGGT
|
||||||
|
ATACACGATTGATTCAAAATCAATTTTCAAAAGAATTGGAGGTTCGAATCCTCTCTAAGG
|
||||||
|
C
|
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025536_334.fasta
Normal file
2
data/rrna/RRNA_16S/00001_RRNA16S_NC_025536_334.fasta
Normal file
@ -0,0 +1,2 @@
|
|||||||
|
>RRNA16S_NC_025536_334 count=1; cluster_weight=1; cluster=RRNA16S_NC_025536_334; cluster_score=1.000000; cluster_center=True;
|
||||||
|
ttctaagtaaactaagttaaaaaaataaaaatttattaaaagccttagtggtgaaatggtatacacgattgattcaaaatcaattttcaaaagaattggaggttcgaatcctctctaaggc
|
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user