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Patch bug in the inverted repeats annotation

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Realize the annotation on the normalized chromosome


Former-commit-id: 73e4e016d7bfe23fc92e4071efb0a4629eb8e21f
Former-commit-id: d44249c0d078d475ca80386bb428fb660289b0dd
This commit is contained in:
Eric Coissac
2015-11-09 17:03:22 +01:00
parent 58e99a81eb
commit 195739b5f8
4 changed files with 53 additions and 20 deletions
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org-annotate.sh
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@ -34,7 +34,7 @@ pushTmpDir ORG.organnot
loginfo "Done."
loginfo "Annotating the Inverted repeats and Single copies (LSC and SSC)..."
${PROG_DIR}/detectors/ir/bin/go_ir.sh ${QUERY} > "${RESULTS}.annot"
${PROG_DIR}/detectors/ir/bin/go_ir.sh "${RESULTS}.norm.fasta" > "${RESULTS}.annot"
loginfo "Done."
loginfo "Annotating the tRNA..."