PhyloSkims/annotate
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Change rRNA gene name to rra16s and so on...

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Former-commit-id: e5e1209d73020bd939ae6b81a993910f244f3ace
Former-commit-id: 4f027f9f52be5fc48832c77dedfa41240b903680
This commit is contained in:
Eric Coissac
2022-02-17 18:40:34 +01:00
parent 18453afeae
commit 3b584dbebd
1 changed files with 2 additions and 2 deletions
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detectors/rrna/bin/go_rrna.sh
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@ -46,8 +46,8 @@ pushTmpDir ORG.rrna
loc="complement("loc")"} \ loc="complement("loc")"} \
(full==1) {match($1,"_..*S");\ (full==1) {match($1,"_..*S");\
rrna=substr($1,RSTART+1,RLENGTH-1);\ rrna=substr($1,RSTART+1,RLENGTH-1);\
print "FT rRNA " loc; \ print "FT rRNA " loc; \
print "FT /gene=\""rrna" rRNA\"" print "FT /gene=\"rrn"rrna"\""
print "FT /product=\""rrna" ribosomal RNA\"" print "FT /product=\""rrna" ribosomal RNA\""
print "FT /locus_tag=\"\""; print "FT /locus_tag=\"\"";
full=0 full=0