PhyloSkims/annotate
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modified:   .gitignore
	new file:   data/cds/sp_chlorodb/parameters.sh
	deleted:    data/ir/LSC_RefDB.fasta
	deleted:    data/ir/SSC_RefDB.fasta
	modified:   detectors/cds/bin/go_cds.sh
	modified:   detectors/normalize/lib/lookforIR.lib.sh
	modified:   detectors/normalize/lib/selectIR.py
	modified:   organnot/Dockerfile
	new file:   organnot/README.md
	new file:   organnot/dorgannot
	deleted:    ports/.DS_Store
	deleted:    src/ncbiblast/binaries/.gitignore
	deleted:    src/prokov/lxpack/tests/S.fasta
	deleted:    src/prokov/lxpack/tests/St.fasta
	deleted:    src/prokov/lxpack/tests/Stt.fasta
	deleted:    src/prokov/lxpack/tests/aS.fasta
	deleted:    src/prokov/lxpack/tests/aSt.fasta
	deleted:    src/prokov/lxpack/tests/aStt.fasta
	deleted:    src/prokov/lxpack/tests/aaS.fasta
	deleted:    src/prokov/lxpack/tests/aaSt.fasta
	deleted:    src/prokov/lxpack/tests/aaStt.fasta
	new file:   src/repseek/repseek-2014.09.tgz
This commit is contained in:
Eric Coissac
2025-03-05 21:56:39 +01:00
parent 5d09615f27
commit 4b71fe8c4c
22 changed files with 94 additions and 75646 deletions
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@ -1,16 +1,20 @@
**/*.fasta.gz
**/*.fasta
**/*.gbk
**/*.gbff
**/.DS_Store
**/*.log
**/*.dat
**/toto*
ports/**
/test/
/samples/
/toto.embl
/toto.fasta
/toto.log
data/cds/sp_chlorodb/genes
data/cds/sp_chlorodb/rawdata
phylonorway
src/gnuparallel/build.i386-darwin
!data/**
!data/**
data/**/*.log
data/rrna/RRNA_*/*.fasta.gz
data/rrna/RRNA_*/*/*.fasta.gz
data/ir/*.fasta.gz