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Patch for algae chloroplast. Require to come back on this patch

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Former-commit-id: 2ed9c6423fc92949cb3ef3f0293fef9fe2d581b6
Former-commit-id: cb3be1bfa89dd67c05dba49d2dd44f03016fe7d9
This commit is contained in:
Eric Coissac
2023-07-13 00:38:24 +02:00
parent 702442245e
commit 4e51d42b85
1 changed files with 10 additions and 5 deletions
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13
detectors/normalize/lib/selectIR.py
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@ -47,11 +47,16 @@ for line in data:
for p in range(begin,end):
chr[p]+=direction
maxSSC = float(max(abs(n) for n in chloro['SSC']))
maxLSC = float(max(abs(n) for n in chloro['LSC']))
# <Zafacs> 07/13/2023
# Hack for avoiding crash when LSC and SSC have no blast similarity
# Need to be reworked
if (len(chloro['SSC']) > 0) :
maxSSC = float(max(abs(n) for n in chloro['SSC']))
chloro['SSC']=[n / maxSSC for n in chloro['SSC']]
chloro['SSC']=[n / maxSSC for n in chloro['SSC']]
chloro['LSC']=[n / maxLSC for n in chloro['LSC']]
if (len(chloro['LSC']) > 0) :
maxLSC = float(max(abs(n) for n in chloro['LSC']))
chloro['LSC']=[n / maxLSC for n in chloro['LSC']]
scoreMax=0
len1Max=0