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Adds detection of RPS12 and managment of locus tags

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Former-commit-id: b9b17708eaaa27580f1e99bd3c375d4b6aba4d79
Former-commit-id: 369361ffa58e65b19ab1005bdf7960924f24ca08
This commit is contained in:
Eric Coissac
2022-02-14 14:21:50 +01:00
parent 9648bbb874
commit 59fcad1c42
5 changed files with 132 additions and 4 deletions
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detectors/trna/lib/aragorn_wrapper.awk
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@ -167,7 +167,9 @@ function emblTRNA(geneid,trna,loc,anti,intron,notes,seq) {
print "FT tRNA " loc;
print "FT /gene=\""trna"\"";
print "FT /anticodon=\""anti"\"";
# print "FT /note=\"*anticodon: "anti"\"";
print "FT /product=\""product"("anti")\"";
print "FT /locus_tag=\"\"";
# print "FT /inference=\"Aragorn-1.2.38\"";
if (notes!="-")
print "FT /note=\""notes"\"";