Switch to a swissprot based reference database for CDS annotation
Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
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@ -142,8 +142,7 @@ function Unk(s) {
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}
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/^e similarity/ {
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split($12, a, "@")
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Simil = a[1] ":" a[2]
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Simil = a[1] "UniProtKB/Swiss-Prot:" $12
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next
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}
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@ -179,7 +178,7 @@ function Unk(s) {
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QQualifier("note","nonfunctional due to a frameshift")
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}
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QQualifier("product", Product)
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QQualifier("inference", "similar to DNA sequence:" Simil)
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QQualifier("inference", "similar to " Simil)
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# QQualifier("inference", "org.annot -- detect pass:" PassType ":" PassInfo)
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if (FrameShift==0) {
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if (match(Translat,/\*/)>0) {
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