First version of the tRNA detector and of the global organnot.sh script · c32f7cdde6 - annotate - Gitea: Git with a cup of tea

PhyloSkims/annotate

First version of the tRNA detector and of the global organnot.sh script

Former-commit-id: f2a75cf99b24875c90c426c2afb22a75b972bf60
Former-commit-id: 65e3dfb35df06ca69bb29b690c9a40e8940ac6bf

This commit is contained in:

Eric Coissac

2015-10-11 10:39:59 -03:00

parent 6015339839

commit c32f7cdde6

9 changed files with 175 additions and 133 deletions

									
										8

detectors/normalize/lib/lookforIR.lib.sh
									
												View File
												
				@ -47,7 +47,9 @@ function lookForIR {

				}

				SCDB="${IR_DATA_DIR}/SC_RefDB"

				QUERY="${CALL_DIR}/$1"

				openLogFile "${QUERY/.*/}.log"

				if [[ ! "$1" =~ ^/ ]]; then

					QUERY="${CALL_DIR}/$1"

				else

					QUERY="$1"

				fi