PhyloSkims/annotate
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A new set of protein cleaned for the CDS detector prepared using the

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clusterizecore.sh script from the detectors/cds/lib folder.

The CDS detector is now modified to use the clean.fst files.


Former-commit-id: e30a53b5b6b658388af4b2640b30e6765c729894
Former-commit-id: 3015ad50d25248fb117ab00e816b00fde1f9ba1d
This commit is contained in:
Eric Coissac
2016-10-05 08:01:30 -03:00
parent 3a8860aaf7
commit d4da1d01fd
86 changed files with 202819 additions and 14 deletions
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2
org-annotate.sh
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@ -151,7 +151,7 @@ pushTmpDir ORG.organnot
loginfo "Done."
loginfo "Annotating the CDS..."
tcsh -f ${PROG_DIR}/detectors/cds/bin/go_cds.sh "${RESULTS}.norm.fasta" >> "${RESULTS}.annot"
tcsh -f ${PROG_DIR}/detectors/cds/bin/go_cds.csh "${RESULTS}.norm.fasta" >> "${RESULTS}.annot"
loginfo "Done."
if (( partial == 0 )) ; then