cds/tools/chlorodb added

Former-commit-id: 0579e878a69b7c285ca71870e9ca5730649a2fda
Former-commit-id: 7cced5b488441d87bf070a9a444317db0e048880
This commit is contained in:
alain viari
2015-11-13 17:41:18 +01:00
parent 0d5f0c1f20
commit e4d6a8484d
585 changed files with 4750 additions and 50 deletions

View File

@ -1,5 +1,7 @@
#!/bin/csh -f
setenv Verbose 1
setenv ORG_HOME `dirname $0`/../../..
source $ORG_HOME/scripts/csh_init.sh
@ -8,9 +10,9 @@ echo "+ testing CDS"
setenv TMP_CLEANUP 0
setenv PASS1_SPEEDUP 1
setenv PASS1_SLOWDOWN 0
setenv PASS1_BLASTX_FILTER_NBMAX 10
setenv PASS1_BLASTX_FILTER_NBMAX 5
`dirname $0`/../bin/go_cds.sh test.fst > test.bak
`dirname $0`/../bin/go_cds.sh test.fst test.db > test.bak
diff -q test.bak test.ref >& /dev/null
@ -18,7 +20,7 @@ set stat = $status
if ($stat == 0) then
echo "+ $VTC[3]CDS test Ok$VTC[1]"
\rm -r test.bak test.tmp
\rm -r test.bak test.tmp test.db/*.fst.p??
else
echo "* $VTC[2]CDS test Failure$VTC[1]"
endif