2c012eec8e
first batch
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Former-commit-id: 1eecb206a17c4aff21d1170b48db134ce3c4f14e
2025-03-01 16:15:28 +01:00
831669433e
Switch to a swissprot based reference database for CDS annotation
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Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f
Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
2022-02-16 22:50:17 +01:00
81657a288a
Modify script to accept compressed genome files
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Former-commit-id: f816e3ce8b10e2ca3f1aa9ae969c24e699368e25
Former-commit-id: 16fb412552debdfd2172926e8a8b63be05257bdf
2018-04-05 17:58:19 +02:00
2261fa1c48
Switch from awk to gawk
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Former-commit-id: 70b104ab89d4c90a35925dbbcacdafaf6c1f2836
Former-commit-id: bf29abf66345cbc0ca81461064dcca63dfd4c15c
2015-11-08 19:33:00 +01:00
efb9949075
CDS detector added
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Former-commit-id: a72f30f90d22cc3c7ff6059e0254e47911bb5af1
Former-commit-id: db0264bdbe5136b6e6dc44e4788175a257439643
2015-11-08 14:28:57 +01:00
c32f7cdde6
First version of the tRNA detector and of the global organnot.sh script
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Former-commit-id: f2a75cf99b24875c90c426c2afb22a75b972bf60
Former-commit-id: 65e3dfb35df06ca69bb29b690c9a40e8940ac6bf
2015-10-11 10:39:59 -03:00
b75035064c
Patch building of the Single copy reference DB to make a single blast
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database for Large and Small Single copy
Former-commit-id: 9bad3443085b2b6b066c7f33f3eaf2e49b5e8992
Former-commit-id: 15ce54a189d9def4b824c149f0ba5ba036794567
2015-10-07 12:29:48 -03:00
37e1ecc9fd
Add scripts to generate reference DBs for LSC and SSC
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Former-commit-id: 4d09933673c30d6a9b2b9cc985b33ef23d7a99f4
2015-10-07 11:32:17 -03:00
