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modified: .gitignore new file: data/cds/sp_chlorodb/parameters.sh deleted: data/ir/LSC_RefDB.fasta deleted: data/ir/SSC_RefDB.fasta modified: detectors/cds/bin/go_cds.sh modified: detectors/normalize/lib/lookforIR.lib.sh modified: detectors/normalize/lib/selectIR.py modified: organnot/Dockerfile new file: organnot/README.md new file: organnot/dorgannot deleted: ports/.DS_Store deleted: src/ncbiblast/binaries/.gitignore deleted: src/prokov/lxpack/tests/S.fasta deleted: src/prokov/lxpack/tests/St.fasta deleted: src/prokov/lxpack/tests/Stt.fasta deleted: src/prokov/lxpack/tests/aS.fasta deleted: src/prokov/lxpack/tests/aSt.fasta deleted: src/prokov/lxpack/tests/aStt.fasta deleted: src/prokov/lxpack/tests/aaS.fasta deleted: src/prokov/lxpack/tests/aaSt.fasta deleted: src/prokov/lxpack/tests/aaStt.fasta new file: src/repseek/repseek-2014.09.tgz
16 lines
452 B
Bash
Executable File
16 lines
452 B
Bash
Executable File
#!/bin/bash
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#IMAGE=gricad-registry.univ-grenoble-alpes.fr/leca/projets/malbio/phyloskims
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IMAGE=phyloskims/annotate
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TAG=latest
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singularity -h >/dev/null 2>&1 && DOCKER="singularity --silent exec --bind .:/data docker://"
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docker -h >/dev/null 2>&1 && DOCKER="docker run --volume .:/data "
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if [[ -z "$DOCKER" ]] ; then
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echo "Cannot found neither singularity or docker on your system"
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exit 1
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fi
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eval "${DOCKER}${IMAGE}:${TAG} organnot $*"
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