085a5ff2a7
Former-commit-id: 54638fc7623ec0485109b0b5879144f8f2514213 Former-commit-id: 23f43cd31169d95df12ae1c207d9fd1c924d26b1
46 lines
1.0 KiB
C++
46 lines
1.0 KiB
C++
#ifndef DistCalc_h
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#define DistCalc_h
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typedef float dist_t;
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const dist_t BIG_DIST = (dist_t) 1e29;
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class DistFunc;
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class DistCalc
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{
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public:
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virtual void CalcDistRange(unsigned i, dist_t Dist[]) const = 0;
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virtual unsigned GetCount() const = 0;
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virtual unsigned GetId(unsigned i) const = 0;
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virtual const char *GetName(unsigned i) const = 0;
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};
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class DistCalcDF : public DistCalc
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{
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public:
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void Init(const DistFunc &DF);
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virtual void CalcDistRange(unsigned i, dist_t Dist[]) const;
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virtual unsigned GetCount() const;
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virtual unsigned GetId(unsigned i) const;
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virtual const char *GetName(unsigned i) const;
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private:
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const DistFunc *m_ptrDF;
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};
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class DistCalcMSA : public DistCalc
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{
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public:
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void Init(const MSA &msa, DISTANCE Distance);
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virtual void CalcDistRange(unsigned i, dist_t Dist[]) const;
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virtual unsigned GetCount() const;
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virtual unsigned GetId(unsigned i) const;
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virtual const char *GetName(unsigned i) const;
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private:
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const MSA *m_ptrMSA;
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DISTANCE m_Distance;
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};
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#endif // DistCalc_h
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