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annotate/data/trna/CAU_tRNA_DB.log
Eric Coissac 5a1c8283db Freshly regerenrated CAU tRNA reference library with the new tool script
Former-commit-id: b2808b9d4462c32d0d81fd4f8d134fb94ad9b51c
Former-commit-id: a1db9d37bba3adf1100c4418b9211aa49aa00da7
2018-04-05 18:31:49 +02:00

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2015-10-10 18:52:35 [OA INFO ] 63859 -- Selecting Viridiplantae genebank entries...
2015-10-10 18:52:44 [OA INFO ] 63859 -- --> 695 entries selected
2015-10-10 18:52:44 [OA INFO ] 63859 -- Done
2015-10-10 18:52:44 [OA INFO ] 63859 -- Extracting the CAU tRNA from the plants entries...
2015-10-10 19:03:07 [OA INFO ] 63859 -- Done
2015-10-10 19:03:07 [OA INFO ] 63859 -- Sorting the CAU tRNA...
2015-10-10 19:03:07 [OA INFO ] 63859 -- Extract and dereplicate trnI...
2015-10-10 19:03:07 [OA INFO ] 63859 -- Extract and dereplicate trnM...
2015-10-10 19:03:07 [OA INFO ] 63859 -- Extract and dereplicate trnfM...
2015-10-10 19:03:07 [OA INFO ] 63859 -- Done
2015-10-10 19:03:07 [OA INFO ] 63859 -- Cleaning the CAU tRNA...
2015-10-10 19:03:07 [OA INFO ] 63859 -- First pass...
2015-10-10 19:03:09 [OA INFO ] 63859 -- --> 420 trnCAU.good.ids sequences kept
2015-10-10 19:03:09 [OA INFO ] 63859 -- Second pass...
2015-10-10 19:03:11 [OA INFO ] 63859 -- --> 419 trnCAU.good.ids sequences kept
2015-10-10 19:03:11 [OA INFO ] 63859 -- Done
2015-10-10 19:03:11 [OA INFO ] 63859 -- Installing the CAU tRNA database...
2015-10-10 19:03:11 [OA INFO ] 63859 -- Done
2018-04-05 18:17:45 [OA INFO ] 1072 -- Selecting Viridiplantae genebank entries...
2018-04-05 18:17:45 [OA INFO ] 1072 -- --> 0 entries selected
2018-04-05 18:17:45 [OA INFO ] 1072 -- Done
2018-04-05 18:17:45 [OA INFO ] 1072 -- Extracting the CAU tRNA from the plants entries...
2018-04-05 18:17:45 [OA INFO ] 1072 -- Done
2018-04-05 18:17:45 [OA INFO ] 1072 -- Installing the CAU tRNA database...
2018-04-05 18:17:45 [OA INFO ] 1072 -- Done
2018-04-05 18:18:34 [OA INFO ] 1170 -- Selecting Viridiplantae genebank entries...
2018-04-05 18:18:36 [OA INFO ] 1170 -- --> 0 entries selected
2018-04-05 18:18:36 [OA INFO ] 1170 -- Done
2018-04-05 18:18:36 [OA INFO ] 1170 -- Extracting the CAU tRNA from the plants entries...
2018-04-05 18:18:36 [OA INFO ] 1170 -- Done
2018-04-05 18:18:36 [OA INFO ] 1170 -- Installing the CAU tRNA database...
2018-04-05 18:18:36 [OA INFO ] 1170 -- Done
2018-04-05 18:19:01 [OA INFO ] 1778 -- Selecting Viridiplantae genebank entries...
2018-04-05 18:19:09 [OA INFO ] 1778 -- --> 461 entries selected
2018-04-05 18:19:09 [OA INFO ] 1778 -- Done
2018-04-05 18:19:09 [OA INFO ] 1778 -- Extracting the CAU tRNA from the plants entries...
2018-04-05 18:26:03 [OA INFO ] 1778 -- Done
2018-04-05 18:26:03 [OA INFO ] 1778 -- Installing the CAU tRNA database...
2018-04-05 18:26:03 [OA INFO ] 1778 -- Done