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ecotag: fixed the generated column comments formatting that would

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generate errors
This commit is contained in:
Celine Mercier
2020-02-12 14:23:17 +01:00
parent 219c0d6fdc
commit d32cfdcce5
1 changed files with 5 additions and 5 deletions
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10
src/obi_ecotag.c
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@ -100,35 +100,35 @@ int print_assignment_result(Obiview_p output_view, index_t line,
static int create_output_columns(Obiview_p o_view) static int create_output_columns(Obiview_p o_view)
{ {
// Score column // Score column
if (obi_view_add_column(o_view, ECOTAG_SCORE_COLUMN_NAME, -1, NULL, OBI_FLOAT, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_SCORE_COLUMN_NAME, true) < 0) if (obi_view_add_column(o_view, ECOTAG_SCORE_COLUMN_NAME, -1, NULL, OBI_FLOAT, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0)
{ {
obidebug(1, "\nError creating the column for the score in ecotag"); obidebug(1, "\nError creating the column for the score in ecotag");
return -1; return -1;
} }
// Assigned taxid column // Assigned taxid column
if (obi_view_add_column(o_view, ECOTAG_TAXID_COLUMN_NAME, -1, NULL, OBI_INT, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_TAXID_COLUMN_NAME, true) < 0) if (obi_view_add_column(o_view, ECOTAG_TAXID_COLUMN_NAME, -1, NULL, OBI_INT, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0)
{ {
obidebug(1, "\nError creating the column for the assigned taxid in ecotag"); obidebug(1, "\nError creating the column for the assigned taxid in ecotag");
return -1; return -1;
} }
// Assigned scientific name column // Assigned scientific name column
if (obi_view_add_column(o_view, ECOTAG_NAME_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_NAME_COLUMN_NAME, true) < 0) if (obi_view_add_column(o_view, ECOTAG_NAME_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0)
{ {
obidebug(1, "\nError creating the column for the assigned scientific name in ecotag"); obidebug(1, "\nError creating the column for the assigned scientific name in ecotag");
return -1; return -1;
} }
// Assignement status column // Assignement status column
if (obi_view_add_column(o_view, ECOTAG_STATUS_COLUMN_NAME, -1, NULL, OBI_BOOL, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_STATUS_COLUMN_NAME, true) < 0) if (obi_view_add_column(o_view, ECOTAG_STATUS_COLUMN_NAME, -1, NULL, OBI_BOOL, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0)
{ {
obidebug(1, "\nError creating the column for the assignment status in ecotag"); obidebug(1, "\nError creating the column for the assignment status in ecotag");
return -1; return -1;
} }
// Column for array of best match ids // Column for array of best match ids
if (obi_view_add_column(o_view, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, true, false, NULL, NULL, -1, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, true) < 0) if (obi_view_add_column(o_view, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, true, false, NULL, NULL, -1, "{}", true) < 0)
{ {
obidebug(1, "\nError creating the column for the array of ids of the best match in ecotag"); obidebug(1, "\nError creating the column for the array of ids of the best match in ecotag");
return -1; return -1;