|
|
366264828e
|
Renamed MurmurHash2.c file to murmurhash2.c as it could be a problem
|
2016-04-26 14:29:17 +02:00 |
|
|
|
d3a6ff6043
|
Removed deprecated code
|
2016-04-26 14:27:16 +02:00 |
|
|
|
5ca84b91dc
|
Merge branch 'master' of git@git.metabarcoding.org:obitools/obitools3.git
|
2016-04-25 18:35:57 +02:00 |
|
|
|
87935c6678
|
Fixed all compilation problems with new function names, locations etc
|
2016-04-25 18:35:02 +02:00 |
|
|
|
92980508c0
|
Made the function to clone a column in the context of a view private
|
2016-04-25 18:15:25 +02:00 |
|
|
|
65880db422
|
Made function to update the line count of a view private
|
2016-04-25 18:11:37 +02:00 |
|
|
|
767d9c7804
|
Reordered view functions for better coherence
|
2016-04-25 18:07:58 +02:00 |
|
|
|
2566377e2a
|
Updated the documentation for utils functions
|
2016-04-25 18:02:58 +02:00 |
|
|
|
1fbbdd43f9
|
Updated obiversion_t declaration
|
2016-04-25 17:58:37 +02:00 |
|
|
|
8cdfbb379e
|
Documentation for views and reworked the code a little
|
2016-04-25 17:58:12 +02:00 |
|
|
|
0a55e26520
|
Reworked obiview code and added more comments
|
2016-04-25 11:37:53 +02:00 |
|
|
|
68a8509c12
|
Updated documentation in obitypes.h
|
2016-04-25 10:33:01 +02:00 |
|
|
|
5f98d2ed5c
|
Fixed the calculation of the size of data for OBI_STR and OBI_SEQ
columns
|
2016-04-25 10:26:51 +02:00 |
|
|
|
ef1be141c1
|
Update Licence to english version
|
2016-04-23 18:03:50 +02:00 |
|
|
|
bbfd40d56d
|
Add license
|
2016-04-23 18:03:10 +02:00 |
|
|
|
5d08da46a2
|
Updated the documentation in obidmscolumn.h
|
2016-04-22 17:55:53 +02:00 |
|
|
|
66045acf1d
|
Creating a column now uses the function to create the indexer name if
one was not provided
|
2016-04-22 17:47:00 +02:00 |
|
|
|
6977c4315c
|
Improved function to build an indexer name
|
2016-04-22 17:38:23 +02:00 |
|
|
|
839b3000a8
|
Added a function to build indexer names
|
2016-04-22 17:08:23 +02:00 |
|
|
|
ffa4557928
|
changed MAP_PRIVATE flags to MAP_SHARED when opening a column because it
seems a lot more efficient
|
2016-04-22 16:26:24 +02:00 |
|
|
|
003cd11362
|
Fixed initialization of NA values for OBI_STR and OBI_SEQ columns
|
2016-04-22 16:14:23 +02:00 |
|
|
|
c87227b65a
|
Uncommented an error message that doesn't need to be commented anymore
|
2016-04-22 16:11:56 +02:00 |
|
|
|
c07e75f2ac
|
Updated the documentation for OBI_STR columns
|
2016-04-22 15:59:32 +02:00 |
|
|
|
6b394a5cf7
|
Updated the documentation for OBI_SEQ columns
|
2016-04-22 15:58:20 +02:00 |
|
|
|
2416b8ccd8
|
Deleted more unused inclusions in OBI_STR and OBI_SEQ column types code
|
2016-04-22 15:56:09 +02:00 |
|
|
|
b9921e111d
|
Removed unused inclusions and definitions in all column types code
|
2016-04-22 15:50:19 +02:00 |
|
|
|
8f5aa8841d
|
Removed unused definition in OBI_IDX columns code
|
2016-04-22 15:44:30 +02:00 |
|
|
|
900d67de87
|
Updated the documentation for columns with the type OBI_IDX
|
2016-04-22 15:43:39 +02:00 |
|
|
|
22e3c3eeed
|
Updated the documentation for obidms functions
|
2016-04-22 11:28:09 +02:00 |
|
|
|
4ead37ee48
|
Finished moving obiblob functions to obiblob files and documentation for
obiblob functions
|
2016-04-21 15:18:14 +02:00 |
|
|
|
bce360bbd5
|
Documentation for obiblob indexer API
|
2016-04-21 15:08:40 +02:00 |
|
|
|
2a68cb26f8
|
Improved AVL tree documentation
|
2016-04-21 15:07:27 +02:00 |
|
|
|
043e70ff49
|
Updated AVL documentation
|
2016-04-21 14:39:03 +02:00 |
|
|
|
66021367f6
|
Moved some blob functions to obiblob.c
|
2016-04-21 14:20:26 +02:00 |
|
|
|
e69f44ae3d
|
Little annotations for the murmur hash function.
|
2016-04-21 13:53:29 +02:00 |
|
|
|
1941a3785e
|
Updated encode functions documentation
|
2016-04-21 13:46:02 +02:00 |
|
|
|
c7b8db6a2e
|
Replaced malloc+memset with calloc
|
2016-04-21 13:45:39 +02:00 |
|
|
|
1dc4a3be49
|
Documentation for DNA sequence indexing functions
|
2016-04-21 13:36:51 +02:00 |
|
|
|
09597016fd
|
Short doc for crc function
|
2016-04-21 13:23:52 +02:00 |
|
|
|
1a2fa0923c
|
Documented the functions indexing and retrieving character strings
|
2016-04-21 11:35:21 +02:00 |
|
|
|
00f2f2cc51
|
Documented changes made in bloom functions
|
2016-04-21 11:22:31 +02:00 |
|
|
|
7a88ca619a
|
First obi import (doesn't import tags yet because NA values aren't
handled)
|
2016-04-15 17:00:08 +02:00 |
|
|
|
eddd19a245
|
Changes in obi commands
|
2016-04-15 16:59:21 +02:00 |
|
|
|
2aafecc3b5
|
Changed sequence 'description' to 'definition' everywhere
|
2016-04-15 16:31:43 +02:00 |
|
|
|
094b2371e9
|
Deleted obsolete directory
|
2016-04-15 14:44:31 +02:00 |
|
|
|
c1034d300d
|
merging and fixed git conflict with obiavl.h
|
2016-04-15 13:23:29 +02:00 |
|
|
|
02d67c257f
|
The default name of an AVL is now the column name + '_indexer', and when
an AVL is opened (as opposed to created), it is read-only
|
2016-04-15 12:55:26 +02:00 |
|
|
|
e04ea85d1e
|
Fixed problematic __str__ method and useless declarations in the
OBI_Nuc_Seq_Stored class
|
2016-04-15 11:22:05 +02:00 |
|
|
|
527d3555f0
|
Moved the functions getting full paths for files and directories to
obidms.c/.h files
|
2016-04-15 11:11:13 +02:00 |
|
|
|
71492ad229
|
Made the handling of listing and unlisting opened columns and indexers
functions in the obidms files.
|
2016-04-15 10:49:12 +02:00 |
|
