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• v3.0.0-beta17 a72fea3cc9

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  v3.0.0-beta17 Stable

  coissac released this 2020-05-12 09:24:45 +00:00 | 179 commits to master since this release

  Fixed a bug in obi import stopping the program when the last
  line of a fasta file contained a single nucleotide

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• v3.0.0-beta16 e9a37d8a6e

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  v3.0.0-beta16 Stable

  coissac released this 2020-05-07 15:13:08 +00:00 | 180 commits to master since this release

  Fixed the import and dereplication of old obitools files containing premerged informations, and other minor improvements

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• v3.0.0-beta15 974528b2e6

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  v3.0.0-beta15 Stable

  coissac released this 2020-04-28 14:51:50 +00:00 | 190 commits to master since this release

  Various fixes and improvements, including notable bugs in ecotag and build_ref_db that made ecotag less specific than it should have been.

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• v3.0.0-beta14 8d0b17d87d

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  v3.0.0-beta14 Stable

  coissac released this 2020-04-15 15:50:07 +00:00 | 198 commits to master since this release

  • Fixed a memory bug when importing a taxdump and building the list of merged taxids
  • Improved disk space management when filling columns

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• v3.0.0-beta13 4cf635d001

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  v3.0.0-beta13 Stable

  coissac released this 2020-04-12 15:53:54 +00:00 | 202 commits to master since this release

  • obi import: fixed a critical bug where the last entry of embl and genbank files was not imported.

  • ecopcr now prints a warning instead of stopping when not finding a taxid.

  • Various other small bug fixes, and improvements in documentation, error messages and checks.

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• v3.0.0-beta11 0b4a234671

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  v3.0.0-beta11 Stable

  coissac released this 2020-02-12 13:26:08 +00:00 | 217 commits to master since this release

  Fixed a bug in obi cat when concatenating views with columns having different key sets, and a bug in obi ecotag generating badly formatted column comments

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• v3.0.0-beta10 dc9f897917

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  v3.0.0-beta10 Stable

  coissac released this 2020-02-02 20:17:17 +00:00 | 220 commits to master since this release

  obi import: new option --preread to do a first readthrough of the
  dataset if it contains huge dictionaries for a much faster import.

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• v3.0.0-beta9 18c22cecf9

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  v3.0.0-beta9 Stable

  coissac released this 2020-02-01 14:49:02 +00:00 | 223 commits to master since this release

  Better disk space management when importing files (rewritten columns are deleted).

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• v3.0.0-beta8 c67d668989

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  v3.0.0-beta8 Stable

  coissac released this 2020-01-29 19:23:45 +00:00 | 225 commits to master since this release

  Fixed a bug when importing a file where the first entry would contain a dictionary with a single key

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• v3.0.0-beta7 db0ac37d41

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  v3.0.0-beta7 Stable

  coissac released this 2020-01-29 15:23:27 +00:00 | 226 commits to master since this release

  Added the 'obi' prefix in the bash history commands, and fixed a compilation issue with some versions of gcc.

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