obidemerge: set demerge on sample the default

This commit is contained in:
Eric Coissac
2025-01-10 17:09:44 +01:00
parent d066bb6878
commit 4ae3336135
3 changed files with 4 additions and 14 deletions

View File

@ -8,7 +8,7 @@ import (
// corresponds to the last commit, and not the one when the file will be
// commited
var _Commit = "becb995"
var _Commit = "d066bb6"
var _Version = "Release 4.2.0"
// Version returns the version of the obitools package.

View File

@ -33,12 +33,6 @@ func MakeDemergeWorker(key string) obiseq.SeqWorker {
}
func CLIDemergeSequences(iterator obiiter.IBioSequence) obiiter.IBioSequence {
if CLIHasSlotToDemerge() {
worker := MakeDemergeWorker(CLIDemergeSlot())
return iterator.MakeIWorker(worker, false, obioptions.CLIParallelWorkers(), 0)
}
return iterator
worker := MakeDemergeWorker(CLIDemergeSlot())
return iterator.MakeIWorker(worker, false, obioptions.CLIParallelWorkers(), 0)
}

View File

@ -5,7 +5,7 @@ import (
"github.com/DavidGamba/go-getoptions"
)
var _Demerge = ""
var _Demerge = "sample"
func DemergeOptionSet(options *getoptions.GetOpt) {
@ -24,7 +24,3 @@ func OptionSet(options *getoptions.GetOpt) {
func CLIDemergeSlot() string {
return _Demerge
}
func CLIHasSlotToDemerge() bool {
return _Demerge != ""
}