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Some typos

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This commit is contained in:
Eric Coissac
2025-03-01 08:29:27 +01:00
parent 1e541eac4c
commit 7b23314651
3 changed files with 2 additions and 3 deletions
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2
Release-notes.md
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@ -20,7 +20,7 @@ Its development is still in progress.
- Correction of a bug when using paired sequence file with the **--out** option. - Correction of a bug when using paired sequence file with the **--out** option.
- Correction of a bug in `obitag` when trying to annotate very short sequence of - Correction of a bug in `obitag` when trying to annotate very short sequences of
4 bases or less. 4 bases or less.

1
pkg/obitools/obiconvert/options.go
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@ -31,7 +31,6 @@ var __output_fastjson_format__ = false
var __output_fastobi_format__ = false var __output_fastobi_format__ = false
var __no_progress_bar__ = false var __no_progress_bar__ = false
var __compressed__ = false
var __skip_empty__ = false var __skip_empty__ = false
var __output_file_name__ = "-" var __output_file_name__ = "-"

2
pkg/obitools/obitag/obitag.go
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@ -260,7 +260,7 @@ func CLIAssignTaxonomy(iterator obiiter.IBioSequence,
if taxon != nil { if taxon != nil {
j++ j++
} else { } else {
log.Warnf("Taxid %d is not described in the taxonomy %s."+ log.Warnf("Taxid %s is not described in the taxonomy %s."+
" Sequence %s is discared from the reference database", " Sequence %s is discared from the reference database",
seq.Taxid(), taxo.Name(), seq.Id()) seq.Taxid(), taxo.Name(), seq.Id())
} }