|
|
e6b87ecd02
|
Reduce memory allocation events
Former-commit-id: fbdb2afc857b02adc2593e2278d3bd838e99b0b2
|
2024-06-22 21:01:53 +02:00 |
|
|
|
37c3e16d5d
|
Adds the option --pairing-scale to obipairing
Former-commit-id: c60416708467f5e818e70e08b3c512014b6212f0
|
2023-12-07 12:28:16 +01:00 |
|
|
|
8d77cc4133
|
Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
|
2023-11-29 12:14:37 +01:00 |
|
|
|
b556e045e5
|
Adds option to tune the pairing of the sequences in obipairing and some stats to the results
Former-commit-id: a6cf9cb4d4ab20a433a2534fd7d11cd3ca8ebbaa
|
2023-11-24 12:29:37 +01:00 |
|
|
|
ec31ae86b9
|
Adds some stats in obiparing about fast align results
Former-commit-id: 44f6d6538e759dd7dc1db068a812957f6b20f50d
|
2023-11-24 10:57:10 +01:00 |
|
|
|
ce66b0af2f
|
Patch a bug in the pair-end alignement in case of equality between scores.
Former-commit-id: bbdb761a98b76f2421d1f0a72960e72b13b6e626
|
2023-11-24 09:59:29 +01:00 |
|
|
|
4117cbdd08
|
Stabilize the obipairing output. whant run twice on the same dataset results are identical
|
2023-02-05 11:06:31 +01:00 |
|
|
|
cfddc78161
|
Patch an aligment bug on obipairing
|
2023-01-25 13:22:56 +01:00 |
|
|
|
29563aa94e
|
Rename the Length methods Len to follow GO standart
|
2022-11-17 11:09:58 +01:00 |
|
|
|
abcf02e488
|
Start to use leveled log
|
2022-02-24 12:14:52 +01:00 |
|
|
|
2e7c1834b0
|
Big change iin the data model, and a first version of obiuniq
|
2022-02-21 19:00:23 +01:00 |
|
|
|
64676db3f4
|
Connect the command line options to the algorithm of obipairing
|
2022-01-16 17:30:30 +01:00 |
|
|
|
576a9f4d2d
|
A global version of a Slice pool
|
2022-01-16 00:21:42 +01:00 |
|
|
|
e1b7e1761c
|
Change the memory management for thee BuildAlignment function
|
2022-01-15 19:10:16 +01:00 |
|
|
|
e8fff6477b
|
Work on iterators and recycling of biosequences
|
2022-01-14 23:11:36 +01:00 |
|
|
|
ff40222902
|
Code reefactoring
|
2022-01-14 16:10:19 +01:00 |
|
|
|
45a1765a03
|
Code refactoring
|
2022-01-14 15:46:36 +01:00 |
|
|
|
2163db94d0
|
Code refactoring
|
2022-01-14 15:36:39 +01:00 |
|
|
|
b9b9c0f179
|
Patch module name from oa2 to obitools
|
2022-01-13 23:43:01 +01:00 |
|
|
|
f53bf1b804
|
First commit
|
2022-01-13 23:27:39 +01:00 |
|
