Eric Coissac 5b98393a68 Refactor sequence file reading ...

Former-commit-id: 3dcb96e68da648d72bb585da047e3496427d7851

2024-05-01 00:50:23 +02:00

..

obialign

Adds the option --pairing-scale to obipairing

2023-12-07 12:28:16 +01:00

obiapat

Patch a bug in the subseq and revcomplement methods. That patchs the bug in the option -c of obipcr

2024-03-11 10:54:37 +01:00

obichunk

homogenize worker count

2023-12-20 08:14:07 +01:00

obicorazick

Change the API of workers

2024-03-02 16:03:46 -04:00

obiformats

Refactor sequence file reading

2024-05-01 00:50:23 +02:00

obiiter

Refactor sequence file reading

2024-05-01 00:50:23 +02:00

obikmer

Make obiconsensus using the count of the sequences

2024-04-03 12:58:32 +02:00

obilua

Add a basic managment of obisequenceslice to obiscript

2024-04-16 12:58:25 +02:00

obingslibrary

few small correction

2024-03-06 12:52:22 -03:00

obioptions

Refactor sequence file reading

2024-05-01 00:50:23 +02:00

obiseq

Patch a bug in the subseq and revcomplement methods. That patchs the bug in the option -c of obipcr

2024-03-11 10:54:37 +01:00

obistats

update the geometric obitag

2024-01-17 23:38:51 +01:00

obisuffix

Change path of the obitools pkg

2023-11-29 12:14:37 +01:00

obitable

many changes ;-)

2023-12-05 15:28:29 +01:00

obitax

Obitag, allow for reference sequences with bad taxid, which are discarded with the emission of a warning

2024-03-18 19:11:41 +01:00

obitools

Simplify the workers code by removing dupplicates

2024-04-30 12:22:22 +02:00

obiutils

Implements the kmeans++ algo to select the landmarks in the geometric method

2023-12-11 16:07:03 +01:00