📦 Add obipipeline crate and refactor path handling
- Introduce new `obipackage` library with pipeline stages, scheduler and worker pool - Refactor path expansion in `obiread`: replace old list_of_files with new PathIter iterator - Add MIME type detection using `infer` crate (fastq/fasta) - Update dependencies in Cargo.lock: add bumpalo, byteorder, cfb (with deps), fnv, infer, js-sys/uuid/wasm-bindgen ecosystem - Fix formatting and improve tests in SuperKmer (canonical, revcomp) * Note: edition = "2024" in obipipeline/Cargo.toml is invalid; should be 2021
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@@ -7,3 +7,5 @@ edition = "2024"
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obikrope = { path = "../obikrope" }
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niffler = { version = "2", default-features = false, features = ["gz", "bz2", "lzma", "zstd"] }
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ureq = "2"
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tracing = "0.1.44"
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tracing-subscriber = { version = "0.3.23", features = ["fmt", "env-filter"] }
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