(feat): refactor superkmer to use obipipeline with flat transforms
- Replace crossbeam-channel-based threading model - Introduce obipipeline crate with Stage::Transform/Flat support - Replace single input + format detection by multiple inputs via PathIter - Implement pipeline stages: open_chunks → normalize → build_superkmers (flat) + write_batch - Add SharedFlatFn for 1→N transformations with delta tracking in scheduler loop
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@@ -668,10 +668,10 @@ name = "obikmer"
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version = "0.1.0"
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dependencies = [
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"clap",
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"crossbeam-channel",
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"obifastwrite",
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"obikrope",
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"obikseq",
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"obipipeline",
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"obiread",
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"obiskbuilder",
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]
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