rename distance subcommand to phylo

Rename the distance CLI subcommand to phylo across the codebase, documentation, and build configurations. Relocate source files from cmd/distance/ to a dedicated cmd/phylo/ module, update all internal routing references, and adjust benchmark scripts and Makefile targets to reflect the new command name.
2026-08-15 10:07:03 +02:00
parent 79346c0c86
commit dd889854cb
19 changed files with 49 additions and 46 deletions
@@ -45,7 +45,7 @@ nav:
      - query: usage/query.md
      - dump: usage/dump.md
      - annotate: usage/annotate.md
-      - distance: usage/distance.md
+      - phylo: usage/phylo.md
      - unitig: usage/unitig.md
      - estimate: usage/estimate.md
      - reindex: usage/reindex.md