Merge pull request 'disable default features for obisys dependency' (#72 ) from push-wvkttrwzkqoo into main

Reviewed-on: #72
disable default features for obisys dependency
2026-08-29 06:18:11 +00:00 · 2026-08-29 08:13:49 +02:00 · 2026-08-29 05:51:37 +00:00 · 2026-08-29 07:46:56 +02:00 · 2026-08-28 23:15:37 +00:00 · 2026-08-29 00:19:31 +02:00
10 changed files with 11 additions and 11 deletions
@@ -1480,7 +1480,7 @@ dependencies = [

 [[package]]
 name = "obikmer"
-version = "1.2.3"
+version = "1.3.1"
 dependencies = [
 "clap",
 "csv",
@@ -11,5 +11,5 @@ obikseq       = { path = "../obikseq" }
 obidebruinj   = { path = "../obidebruinj" }
 obifastwrite  = { path = "../obifastwrite" }
 obicompactvec = { path = "../obicompactvec" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 rayon         = "1"
@@ -14,5 +14,5 @@ obikidxcache  = { path = "../obikidxcache" }
 obikindexer   = { path = "../obikindexer" }
 obidebruinj   = { path = "../obidebruinj" }
 obikalgorithm = { path = "../obikalgorithm" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 tracing       = "0.1.44"
@@ -7,7 +7,7 @@ edition = "2024"
 obikseq          = { path = "../obikseq" }
 obitaxonomy      = { path = "../obitaxonomy" }
 obiskio          = { path = "../obiskio" }
-obisys           = { path = "../obisys" }
+obisys           = { path = "../obisys", default-features = false }
 obicompactvec    = { path = "../obicompactvec" }
 obidebruinj      = { path = "../obidebruinj" }
 obipipeline      = { path = "../obipipeline" }
@@ -9,7 +9,7 @@ obikalgorithm    = { path = "../obikalgorithm" }
 obikseq          = { path = "../obikseq" }
 obidebruinj      = { path = "../obidebruinj" }
 obiskio          = { path = "../obiskio" }
-obisys           = { path = "../obisys" }
+obisys           = { path = "../obisys", default-features = false }
 obicompactvec    = { path = "../obicompactvec" }
 obipipeline      = { path = "../obipipeline" }
 obiread          = { path = "../obiread" }
@@ -1,6 +1,6 @@
 [package]
 name = "obikmer"
-version = "1.2.3"
+version = "1.3.1"
 edition = "2024"

 [[bin]]
@@ -11,7 +11,7 @@ path = "src/main.rs"
 obikseq       = { path = "../obikseq" }
 obiread       = { path = "../obiread" }
 obipipeline   = { path = "../obipipeline" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 obikindex     = { path = "../obikindex", default-features = false }
 obikindexer   = { path = "../obikindexer" }
 obikalgorithm = { path = "../obikalgorithm" }
@@ -11,7 +11,7 @@ obicompactvec = { path = "../obicompactvec" }
 obiskio       = { path = "../obiskio" }
 obikseq       = { path = "../obikseq" }
 obipipeline   = { path = "../obipipeline" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 rayon         = "1"
 tracing       = "0.1.44"

@@ -7,7 +7,7 @@ edition = "2024"
 obikindex        = { path = "../obikindex", default-features = false }
 obikseq          = { path = "../obikseq" }
 obiskio          = { path = "../obiskio" }
-obisys           = { path = "../obisys" }
+obisys           = { path = "../obisys", default-features = false }
 obicompactvec    = { path = "../obicompactvec" }
 obikidxcache     = { path = "../obikidxcache" }
 obiskbuilder     = { path = "../obiskbuilder" }
@@ -10,5 +10,5 @@ obikfilter    = { path = "../obikfilter" }
 obikidxcache  = { path = "../obikidxcache" }
 obikseq       = { path = "../obikseq" }
 obidebruinj   = { path = "../obidebruinj" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 tracing       = "0.1.44"
@@ -8,5 +8,5 @@ obikindex     = { path = "../obikindex" }
 obikfilter    = { path = "../obikfilter" }
 obikalgorithm = { path = "../obikalgorithm" }
 obicompactvec = { path = "../obicompactvec" }
-obisys        = { path = "../obisys" }
+obisys        = { path = "../obisys", default-features = false }
 tracing       = "0.1.44"
Author	SHA1	Message	Date
coissac	43d89d8f02	Merge pull request 'disable default features for obisys dependency' (#72 ) from push-wvkttrwzkqoo into main Reviewed-on: #72	2026-08-29 06:18:11 +00:00
Eric Coissac	8bb1d52514	disable default features for obisys dependency Release / create-release (push) Successful in 2m32s Details Release / build-linux-x86_64 (push) Successful in 7m57s Details Release / build-macos-arm64 (push) Successful in 1m53s Details ci.yml / build (pull_request) Successful in 3m42s Details Update obisys dependency configuration across multiple crates to explicitly set default-features = false. This restricts compilation to only explicitly enabled feature flags, affecting build resolution and potentially compile-time paths or binary size. Also updates the obikmer package version to 1.3.1.	2026-08-29 08:13:49 +02:00
coissac	77d4429645	Merge pull request 'chore: bump obikmer to 1.3.0 and disable obisys default features' (#71 ) from push-sllyqzuztwkr into main Reviewed-on: #71	2026-08-29 05:51:37 +00:00
Eric Coissac	4d55258ada	chore: bump obikmer to 1.3.0 and disable obisys default features Release / create-release (push) Successful in 2m32s Details Release / build-linux-x86_64 (push) Successful in 8m22s Details Release / build-macos-arm64 (push) Failing after 1m15s Details ci.yml / build (pull_request) Successful in 3m33s Details Updates package version and explicitly disables default features for the local obisys dependency.	2026-08-29 07:46:56 +02:00
coissac	7e28ca4853	Merge pull request 'Push zunrplorkwkt' (#70 ) from push-zunrplorkwkt into main Reviewed-on: #70	2026-08-28 23:15:37 +00:00
Eric Coissac	52f26809af	refactor(benchmark): consolidate generated artifacts under run/ directory ci.yml / build (pull_request) Successful in 3m49s Details Restructure the benchmark pipeline to direct all simulated data, indices, statistics, and query outputs into a unified `run/` directory. Update Makefile targets, shell scripts, and Python utilities to resolve paths relative to this new base. Adjust documentation and dependency tracking to match the revised layout, and remove outdated temporary artifacts.	2026-08-29 00:19:31 +02:00