OBIKmers/obikmer
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases 27 Wiki Activity
Files
main
obikmer/src
T
History
Eric Coissac 66ab1d0947
Release / create-release (push) Successful in 2m25s
Details
ci.yml / build (pull_request) Successful in 4m34s
Details
Release / build-linux-x86_64 (push) Successful in 8m18s
Details
Release / build-macos-arm64 (push) Successful in 1m55s
Details
chore: bump obikmer to 1.2.1 and disable obikindex default features 
Updates the obikmer lockfile version to 1.2.1 and configures the obikindex dependency to explicitly disable default features. These are manifest and lockfile adjustments that do not modify source code or alter application behavior.
2026-08-17 13:32:30 +02:00
..
bin
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00
compare_sparse
chore: bump obikmer to 1.2.1 and disable obikindex default features
2026-08-17 13:32:30 +02:00
obicompactvec
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obidebruinj
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obifastwrite
refactor: extract obikindex crate and remove deprecated CLI commands
2026-05-20 18:54:12 +02:00
obikentropy
large refactoring
2026-08-17 09:28:53 +02:00
obikindex
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obikmer
chore: bump obikmer to 1.2.1 and disable obikindex default features
2026-08-17 13:32:30 +02:00
obikpartitionner
fix: respect --force flag during index and partition creation
2026-08-16 11:37:26 +02:00
obikphylo
chore: disable default features for obikindex
2026-08-17 12:33:59 +02:00
obikrope
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obikseq
Extract phylogenetic sibling logic into new obikphylo crate
2026-08-16 14:30:34 +02:00
obilayeredmap
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obipipeline
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obiread
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obiskbuilder
feat: implement per-k-mer sibling counts and central neighbor generation
2026-08-10 15:01:59 +02:00
obiskio
Replace slot-based indexing with iteration order and stream k-mers
2026-08-16 14:07:22 +02:00
obisys
Fix batch enumeration offsets and refactor sibling annex construction
2026-08-16 20:51:19 +02:00
obitaxonomy
feat: introduce obitaxonomy crate for hierarchical taxonomy parsing
2026-06-22 10:24:04 +02:00
Cargo.lock
chore: bump obikmer to 1.2.1 and disable obikindex default features
2026-08-17 13:32:30 +02:00
Cargo.toml
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00
profile.json.gz
🗑️ Refactor entropy and minimizer logic into RollingStat
2026-04-20 16:45:57 +02:00
sankoff_params.yaml
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00