OBIKmers/obikmer - obikmer - Gitea: Git with a cup of tea

OBIKmers/obikmer

T

Eric Coissac 3f8880a7e5 📦 Add infer and new pipeline infrastructure

- Update Cargo.lock with dependency additions (bumpalo, byteorder, cfb, fnv, infer, js-sys, uuid wasm-bindgen)
- Refactor obikseq::superkmer: reorder imports and improve formatting
  - Add `obipipeline` crate with scheduler, error handling & macros (WIP)
- Replace obiread::expand_paths logic with PathIter and path_iterator module
  - Add mimetype detection using `infer` crate via PeekReader wrapper

2026-04-23 21:06:11 +02:00

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

📦 Add obipipeline crate and refactor path handling

2026-04-23 21:06:11 +02:00

📦 Add infer and new pipeline infrastructure

2026-04-23 21:06:11 +02:00

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

.DS_Store

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

.gitignore

🗑️ Refactor entropy and minimizer logic into RollingStat

2026-04-20 16:45:57 +02:00

Cargo.lock

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

CLAUDE.md

first implementation but far to be optimal

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Makefile

first implementation but far to be optimal

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mkdocs.yml

first implementation but far to be optimal

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profile.json.gz

first implementation but far to be optimal

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README.md

first implementation but far to be optimal

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test.sk.fasta

first implementation but far to be optimal

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xxx.HTML

first implementation but far to be optimal

2026-04-19 12:17:16 +02:00

README.md

toto

v1.1.44

Latest

2026-08-11 21:04:49 +00:00

Rust 84.7%

Python 5.8%

Makefile 3%

Shell 2.7%

HTML 2.7%

Other 1.1%