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Eric Coissac 97e65bd831 ♻️ refactor pipeline architecture and fix macOS memory detection 
- Replace WorkerPool-based pipelines with typed `Pipe` abstraction in obipipeline
  - Introduce Pipe/PipeIter for composable, sourceless/sink-less pipelines
- Update partition and superkmer commands to use new Pipe API via make_pipe!
  - Remove Arc<Mutex<...>> patterns; simplify state management
- Fix macOS available_memory() returning 0 by falling back to half total memory in dereplicate()
- Remove unused `format: "zstd"` field from partition.meta
2026-04-30 07:04:03 +02:00
Betula_exilis--IGA-24-33
♻️ refactor pipeline architecture and fix macOS memory detection
2026-04-30 07:04:03 +02:00
data-stress
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
doc
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
docmd
Refactor: Extract utility function for string reversal
2026-04-30 06:58:46 +02:00
scripts
Refactor: Extract utility function for string reversal
2026-04-30 06:58:46 +02:00
src
♻️ refactor pipeline architecture and fix macOS memory detection
2026-04-30 07:04:03 +02:00
target
Refactor: Extract utility function for string reversal
2026-04-30 06:58:46 +02:00
.DS_Store
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
.gitignore
✨ add PhantomData import for generic type safety
2026-04-30 07:04:03 +02:00
Cargo.lock
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
CLAUDE.md
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
debug.log
Refactor: Extract utility function for string reversal
2026-04-30 06:58:46 +02:00
Makefile
Refactor: Simplify user authentication flow
2026-04-28 08:38:26 +02:00
mkdocs.yml
🔧 Replace degenerate minimizer logic with hash-based random ordering
2026-04-27 20:19:43 +02:00
profile.json.gz
Refactor: Simplify user authentication flow
2026-04-28 08:38:26 +02:00
README.md
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
test.sk.fasta
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00
xxx.HTML
first implementation but far to be optimal
2026-04-19 12:17:16 +02:00

README.md

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Readme 226 MiB
Languages
Rust 89.4%
HTML 5.9%
TeX 2.4%
Python 1%
Shell 0.9%
Other 0.4%