obikmer

T

Eric Coissac f09b70b209 🔧 Fix rolling k-mer and minimizer logic

Fix incorrect nucleotide encoding in `rolling_k` update, correct shift amount for reverse complement k-mer (`self.k - 1`, not `k`), and rename method to match semantics. Also add proper windowed minimizer cleanup when received length exceeds k.

2026-04-20 15:43:50 +02:00

data-stress

first implementation but far to be optimal

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doc

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docmd

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src

🔧 Fix rolling k-mer and minimizer logic

2026-04-20 15:43:50 +02:00

target

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.DS_Store

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.gitignore

Add target to .gitignore

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Cargo.lock

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CLAUDE.md

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Makefile

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mkdocs.yml

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profile.json.gz

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README.md

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test.sk.fasta

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xxx.HTML

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README.md

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