OBIKmers/obikmer
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fceb523f1ad037370dab717b9439fc317c3daebe
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Eric Coissac fceb523f1a
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chore: disable default features for obikindex 
Explicitly sets `default-features = false` for the `obikindex` dependency to ensure no default features are activated during dependency resolution and compilation.
2026-08-17 12:33:59 +02:00
..
bin
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00
compare_sparse
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00
obicompactvec
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obidebruinj
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obifastwrite
refactor: extract obikindex crate and remove deprecated CLI commands
2026-05-20 18:54:12 +02:00
obikentropy
large refactoring
2026-08-17 09:28:53 +02:00
obikindex
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obikmer
chore: disable default features for obikindex
2026-08-17 12:33:59 +02:00
obikpartitionner
fix: respect --force flag during index and partition creation
2026-08-16 11:37:26 +02:00
obikphylo
chore: disable default features for obikindex
2026-08-17 12:33:59 +02:00
obikrope
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obikseq
Extract phylogenetic sibling logic into new obikphylo crate
2026-08-16 14:30:34 +02:00
obilayeredmap
Add diagnostic logging and minor internal refactoring
2026-08-17 11:29:31 +02:00
obipipeline
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obiread
Add modular data structures, parallel pipelines, and system profiling
2026-08-14 14:20:08 +02:00
obiskbuilder
feat: implement per-k-mer sibling counts and central neighbor generation
2026-08-10 15:01:59 +02:00
obiskio
Replace slot-based indexing with iteration order and stream k-mers
2026-08-16 14:07:22 +02:00
obisys
Fix batch enumeration offsets and refactor sibling annex construction
2026-08-16 20:51:19 +02:00
obitaxonomy
feat: introduce obitaxonomy crate for hierarchical taxonomy parsing
2026-06-22 10:24:04 +02:00
Cargo.lock
Add TNT configuration directives and tree export commands to script
2026-08-17 11:39:51 +02:00
Cargo.toml
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00
profile.json.gz
🗑️ Refactor entropy and minimizer logic into RollingStat
2026-04-20 16:45:57 +02:00
sankoff_params.yaml
Introduce compare_sparse CLI tool to verify index consistency
2026-08-17 11:16:42 +02:00