coissac
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  • Joined on 2025-05-22
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coissac deleted branch push-ylnwstyzqwrt from OBIKmers/obikmer 2026-06-12 10:10:06 +00:00
coissac pushed to main at OBIKmers/obikmer 2026-06-12 10:10:06 +00:00
97e3fb9761 Merge pull request 'Push ylnwstyzqwrt' (#22) from push-ylnwstyzqwrt into main
b5e027f23b feat: add memory-aware parallel merge scheduling and CLI flags
f44fe042bc feat: add parallel k-mer counting and stats CLI
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coissac merged pull request OBIKmers/obikmer#22 2026-06-12 10:10:04 +00:00
Push ylnwstyzqwrt
coissac created pull request OBIKmers/obikmer#22 2026-06-12 10:09:59 +00:00
Push ylnwstyzqwrt
coissac created branch push-ylnwstyzqwrt in OBIKmers/obikmer 2026-06-12 10:09:55 +00:00
coissac pushed to push-ylnwstyzqwrt at OBIKmers/obikmer 2026-06-12 10:09:55 +00:00
b5e027f23b feat: add memory-aware parallel merge scheduling and CLI flags
f44fe042bc feat: add parallel k-mer counting and stats CLI
Compare 2 commits »
coissac pushed to main at OBIKmers/obikmer 2026-06-09 13:31:27 +00:00
94e0a370b3 Merge pull request 'Push tmpsxsztwpxl' (#21) from push-tmpsxsztwpxl into main
970460be42 refactor: rename rebuild subcommand to filter
e66adef23d feat: add select command for genome column projection and aggregation
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coissac deleted branch push-tmpsxsztwpxl from OBIKmers/obikmer 2026-06-09 13:31:27 +00:00
coissac merged pull request OBIKmers/obikmer#21 2026-06-09 13:31:25 +00:00
Push tmpsxsztwpxl
coissac created pull request OBIKmers/obikmer#21 2026-06-09 13:31:06 +00:00
Push tmpsxsztwpxl
coissac pushed to push-tmpsxsztwpxl at OBIKmers/obikmer 2026-06-09 13:31:00 +00:00
970460be42 refactor: rename rebuild subcommand to filter
e66adef23d feat: add select command for genome column projection and aggregation
Compare 2 commits »
coissac created branch push-tmpsxsztwpxl in OBIKmers/obikmer 2026-06-09 13:31:00 +00:00
coissac deleted branch push-xqswlxlvmyrq from OBIKmers/obikmer 2026-06-09 09:34:14 +00:00
coissac pushed to main at OBIKmers/obikmer 2026-06-09 09:34:14 +00:00
b0dab452f6 Merge pull request 'refactor: optimize dump partition iteration and add progress tracking' (#20) from push-xqswlxlvmyrq into main
db730e9cf6 refactor: optimize dump partition iteration and add progress tracking
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coissac merged pull request OBIKmers/obikmer#20 2026-06-09 09:34:13 +00:00
refactor: optimize dump partition iteration and add progress tracking
coissac created pull request OBIKmers/obikmer#20 2026-06-09 09:34:05 +00:00
refactor: optimize dump partition iteration and add progress tracking
coissac pushed to push-xqswlxlvmyrq at OBIKmers/obikmer 2026-06-09 09:33:45 +00:00
db730e9cf6 refactor: optimize dump partition iteration and add progress tracking
coissac created branch push-xqswlxlvmyrq in OBIKmers/obikmer 2026-06-09 09:33:45 +00:00
coissac deleted branch push-lrwmyplxxzkn from OBIKmers/obikmer 2026-06-09 08:28:22 +00:00
coissac pushed to main at OBIKmers/obikmer 2026-06-09 08:28:22 +00:00
f65ecd19cc Merge pull request 'Push lrwmyplxxzkn' (#19) from push-lrwmyplxxzkn into main
7dd8db1409 docs: document conservative rounding strategy for filtering thresholds
ce45e2fbe1 refactor: centralize k-mer filtering logic and add validation
2465cfbc4b Parallelize partition iteration using Rayon
d626d42ec7 feat: add --head and --presence-threshold to dump and distance
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