Switch to version 1.2.3

Fixed major bug with -f UNITE_FULL option of obiaddtaxids
Merge branch 'master' of git.metabarcoding.org:obitools/obitools
2016-04-04 18:49:10 +02:00 · 2016-04-04 16:36:05 +02:00 · 2016-03-30 16:35:49 +02:00 · 2016-03-17 15:05:18 +01:00
3 changed files with 4 additions and 3 deletions
@@ -19,7 +19,7 @@ from os import path


 PACKAGE = "OBITools"
-VERSION = "1.2.2"
+VERSION = "1.2.3"
 AUTHOR  = 'Eric Coissac'
 EMAIL   = 'eric@coissac.eu'
 URL     = 'metabarcoding.org/obitools'
@@ -48,7 +48,7 @@ Otherwise,
    
    .. code-block:: bash
    
-       > obiaddtaxids -T species_name -g genus_identified.fasta \\
+       > obiaddtaxids -k species_name -g genus_identified.fasta \\
                      -u unidentified.fasta -d my_ecopcr_database \\
                      my_sequences.fasta > identified.fasta

@@ -340,6 +340,7 @@ if __name__=='__main__':
        entries = entryIterator(entries)
    elif options.db_type == 'UNITE_FULL' :
        entryIterator = UNITEIterator_FULL
+        entries = entryIterator(entries)
    elif options.db_type == 'UNITE_GENERAL' :
        entryIterator = UNITEIterator_GENERAL
        entries = entryIterator(entries)
@@ -1,5 +1,5 @@
 major = 1
 minor = 2
-serial= '2'
+serial= '3'

 version = "%2d.%02d %s" % (major,minor,serial)
Author	SHA1	Message	Date
coissac	ffb33f61a9	Switch to version 1.2.3	2016-04-04 18:49:10 +02:00
Celine Mercier	adbeac9684	Fixed major bug with -f UNITE_FULL option of obiaddtaxids	2016-04-04 16:36:05 +02:00
Celine Mercier	4aac47e639	Merge branch 'master' of git.metabarcoding.org:obitools/obitools	2016-03-30 16:35:49 +02:00
Celine Mercier	2028c69b3f	Fixed typo in obiaddtaxids documentation	2016-03-17 15:05:18 +01:00