ecotag: clarified similarity circle documentation
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@@ -48,7 +48,7 @@ def addOptions(parser):
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type=float,
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help="Minimum identity considered for the assignment circle "
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"(sequence is assigned to the LCA of all sequences within a similarity circle of the best matches; "
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"the threshold for this circle is the highest value between <CIRCLE_THRESHOLD> and the best assignment score found). "
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"the threshold for this circle is the highest value between <CIRCLE_THRESHOLD> and the best assignment score found for the query sequence). "
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"Give value as a normalized identity, e.g. 0.95 for an identity of 95%%. "
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"Default: 0.99.")
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