|
|
34e957d3fb
|
Add an option alowwing to use the pool method instead of the concat method when several input files are specified
|
2022-08-21 13:43:00 +02:00 |
|
|
|
5dd835d3e7
|
A first functional version of obiclean
|
2022-08-20 18:01:07 +02:00 |
|
|
|
cf5b4baa54
|
Small bug in sequence counting on merge
|
2022-05-30 16:28:59 +02:00 |
|
|
|
62cd1c44dc
|
Corrects some bug in building the sequence filter
|
2022-02-25 10:36:01 +01:00 |
|
|
|
011898bd9d
|
A first version of obigrep. Normally fully functionnal, but not fully tested
|
2022-02-25 07:29:52 +01:00 |
|
|
|
abcf02e488
|
Start to use leveled log
|
2022-02-24 12:14:52 +01:00 |
|
|
|
f18cc034bb
|
add an option alias -O for the old obi format
|
2022-02-24 07:26:55 +01:00 |
|
|
|
eaf65fbcce
|
Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools
|
2022-02-24 07:08:40 +01:00 |
|
|
|
2e7c1834b0
|
Big change iin the data model, and a first version of obiuniq
|
2022-02-21 19:00:23 +01:00 |
|
|
|
9737f97084
|
before big changes
|
2022-02-18 22:53:09 +01:00 |
|
|
|
37ce3536e1
|
New more functionnal version of obiuniq. But it has a memory leak
|
2022-02-18 10:01:23 +01:00 |
|
|
|
6067b92e2f
|
Adds the notioon of NA value
|
2022-02-18 10:00:42 +01:00 |
|
|
|
ce226acac0
|
Few debug on obidistribute and some progresses on obiunique, but -c and -m options are still not working
|
2022-02-15 10:49:01 +01:00 |
|
|
|
3586ecc483
|
second version of obidistribute and a first buggy version of obiuniq
|
2022-02-15 00:47:02 +01:00 |
|
|
|
b931321ba1
|
Adds the hash option to obidistribute
|
2022-02-14 09:12:57 +01:00 |
|
|
|
eb32620bb3
|
Adds a first version of a new obidistribute command
|
2022-02-14 00:01:01 +01:00 |
|
|
|
38e4655f38
|
Correct for a strange bug...
|
2022-02-07 11:51:35 +01:00 |
|
|
|
98a4363d22
|
obimultiplex saves unassigned sequence
|
2022-02-01 23:25:19 +01:00 |
|
|
|
bc1d7b26a9
|
adds missing file
|
2022-02-01 18:04:11 +01:00 |
|
|
|
8dbda68746
|
Adds the command obimultiplex
|
2022-02-01 17:31:28 +01:00 |
|
|
|
251d3be923
|
Add automatic garbage collection on ApatPattern
|
2022-01-24 17:26:30 +01:00 |
|
|
|
4551df08b1
|
Adds a reader for NGS filter files and change some API for the apat library
|
2022-01-18 13:09:32 +01:00 |
|
|
|
6571296bb2
|
Add some documentation
|
2022-01-16 19:53:39 +01:00 |
|
|
|
64676db3f4
|
Connect the command line options to the algorithm of obipairing
|
2022-01-16 17:30:30 +01:00 |
|
|
|
576a9f4d2d
|
A global version of a Slice pool
|
2022-01-16 00:21:42 +01:00 |
|
|
|
e1b7e1761c
|
Change the memory management for thee BuildAlignment function
|
2022-01-15 19:10:16 +01:00 |
|
|
|
e8fff6477b
|
Work on iterators and recycling of biosequences
|
2022-01-14 23:11:36 +01:00 |
|
|
|
ef66ca4972
|
Code refactoring
|
2022-01-14 17:32:12 +01:00 |
|
|
|
ff40222902
|
Code reefactoring
|
2022-01-14 16:10:19 +01:00 |
|
|
|
b9b9c0f179
|
Patch module name from oa2 to obitools
|
2022-01-13 23:43:01 +01:00 |
|
|
|
f53bf1b804
|
First commit
|
2022-01-13 23:27:39 +01:00 |
|
