6d469bd711
[obiseq] Add length validation for qualities in SetQualities, Take Qualites and Subsequence
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[obiseq] Add length validation for qualities in SetQualities, Take Qualites and Subsequence
- Panic if sequence/qualities length mismatch when setting or taking qualities in BioSequence.
- Add same check before slicing Qualities() for Subsequence to ensure consistency.
2026-04-15 18:20:53 +02:00
coissac
f4d71d4a66
Patch a bug in the subseq and revcomplement methods. That patchs the bug in the option -c of obipcr
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Former-commit-id: 7999b917d07545271036af6e66f53aea27fc6e7b
2024-03-11 10:54:37 +01:00
coissac
2e0c1bd801
Correct the number of workers
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Former-commit-id: febbccfb853263e0761ecfccb0f09c8c1bf88475
2023-11-22 09:46:30 +01:00
coissac
a96ecb4837
Adds some unit test
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Former-commit-id: b1a59df1c87187a1538f30c447d42bbe96402419
2023-11-08 11:13:56 +02:00
coissac
dedf125f6e
Patch a bug in Subsequence and adds few unit tests.
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Former-commit-id: caddc9ad6523e4ef02899bfe83cc8681ef674383
2023-11-08 10:16:34 +02:00
coissac
d23a911080
Change the way sequence definition are managed. They are now when present stored as an attribute
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Former-commit-id: 6e618377c05b42937d2eace3c9668390980ab68c
2023-10-05 07:21:12 +02:00
coissac
988ae79989
Optimize memory allocation of the apat algorithms
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Former-commit-id: 5010c5a666b322715b3b81c1078d325e1f647ede
2023-03-28 19:37:05 +07:00
coissac
29563aa94e
Rename the Length methods Len to follow GO standart
2022-11-17 11:09:58 +01:00
coissac
f8df48338d
Several bug in annotation management
2022-10-12 23:01:47 +02:00
coissac
2e7c1834b0
Big change iin the data model, and a first version of obiuniq
2022-02-21 19:00:23 +01:00
coissac
e9cdfd7e03
Make subseq method dealing with qualities
2022-02-01 18:49:32 +01:00
coissac
576a9f4d2d
A global version of a Slice pool
2022-01-16 00:21:42 +01:00
coissac
b9b9c0f179
Patch module name from oa2 to obitools
2022-01-13 23:43:01 +01:00
coissac
f53bf1b804
First commit
2022-01-13 23:27:39 +01:00
Eric Coissac
coissac