Commit Graph

10 Commits

Author SHA1 Message Date
Eric Coissac
5a3705b6bb Adds the --silent-warning options to the obitools commands and removes the --pared-with option from some of the obitols commands. 2025-03-25 16:44:46 +01:00
Eric Coissac
ffd67252c3 patch a bug in obimultiplex: change option -t into -s 2025-01-23 13:50:24 +01:00
Eric Coissac
3a7661f324 obimultiplex2 in now obimultiplex
Former-commit-id: ee6f5e15a3f1729dfc2806d039c842c9c3bdd343
2024-06-07 09:04:37 +02:00
Eric Coissac
65f5109957 Plenty of small bugs
Former-commit-id: 42c7fab7d65906c80ab4cd32da6867ff21842ea8
2024-06-04 16:49:12 +02:00
Eric Coissac
38945d0a41 Adds the --template option to obimultiplex
Former-commit-id: 349e9f278abd6a6c258f31d99ea04853a79c62de
2024-05-31 11:34:06 +02:00
Eric Coissac
4487723d14 Adds possibility to provide the ngsfilter configuration as a CSV file
Former-commit-id: f0fd2cb1a7b149ae2a330edc5087b21be2c4585b
2024-05-31 11:08:20 +02:00
8d77cc4133 Change path of the obitools pkg
Former-commit-id: 311cbf8df3b990b393c6f4885d62e74564423b65
2023-11-29 12:14:37 +01:00
27d6c60e25 Add the possibility to look for patterns allowing indels.
Former-commit-id: 0599c2b0ad16df086dbdb08e491503870d8904be
2023-03-20 15:28:24 +07:00
8dbda68746 Adds the command obimultiplex 2022-02-01 17:31:28 +01:00
4551df08b1 Adds a reader for NGS filter files and change some API for the apat library 2022-01-18 13:09:32 +01:00