9 Commits

Include renames

Author	SHA1	Message	Date
Eric Coissac	1a28d5ed64	Add progress bar configuration and conditional display ... This commit introduces a new configuration module `obidefault` to manage progress bar settings, allowing users to disable progress bars via a `--no-progressbar` option. It updates various packages to conditionally display progress bars based on this new configuration, improving user experience by providing control over progress bar output. The changes also include improvements to progress bar handling in several packages, ensuring they are only displayed when appropriate (e.g., when stderr is a terminal and stdout is not piped).	2026-02-08 16:14:02 +01:00
Eric Coissac	4e4fac491f	Fisrt versin of the two levels indexing ... Former-commit-id: 4d86483bc120e27cb6f5d2c216596d410274fc69	2024-07-12 15:17:48 +02:00
coissac	072b85e155	change the model for representing paired reads and extend its usage to other commands	2023-02-23 23:35:58 +01:00
coissac	85349668d0	Add some options to obiannotate	2023-02-16 13:32:27 +01:00
coissac	f97f92df72	rename the iterator class	2023-01-22 22:04:17 +01:00
coissac	29563aa94e	Rename the Length methods Len to follow GO standart	2022-11-17 11:09:58 +01:00
coissac	f3ddac0f50	Small adjustment	2022-10-27 11:18:44 +02:00
coissac	abcf02e488	Start to use leveled log	2022-02-24 12:14:52 +01:00
coissac	eaf65fbcce	Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools	2022-02-24 07:08:40 +01:00