20 Commits

Author	SHA1	Message	Date
coissac	abcf02e488	Start to use leveled log	2022-02-24 12:14:52 +01:00
coissac	eaf65fbcce	Some code refactoring, a new version of obiuniq more efficient in memory and a first make file allowing to build obitools	2022-02-24 07:08:40 +01:00
coissac	2e7c1834b0	Big change iin the data model, and a first version of obiuniq	2022-02-21 19:00:23 +01:00
coissac	9737f97084	before big changes	2022-02-18 22:53:09 +01:00
coissac	3586ecc483	second version of obidistribute and a first buggy version of obiuniq	2022-02-15 00:47:02 +01:00
coissac	eb32620bb3	Adds a first version of a new obidistribute command	2022-02-14 00:01:01 +01:00
coissac	38e4655f38	Correct for a strange bug...	2022-02-07 11:51:35 +01:00
coissac	98a4363d22	obimultiplex saves unassigned sequence	2022-02-01 23:25:19 +01:00
coissac	8dbda68746	Adds the command obimultiplex	2022-02-01 17:31:28 +01:00
coissac	251d3be923	Add automatic garbage collection on ApatPattern	2022-01-24 17:26:30 +01:00
coissac	4551df08b1	Adds a reader for NGS filter files and change some API for the apat library	2022-01-18 13:09:32 +01:00
coissac	6571296bb2	Add some documentation	2022-01-16 19:53:39 +01:00
coissac	64676db3f4	Connect the command line options to the algorithm of obipairing	2022-01-16 17:30:30 +01:00
coissac	576a9f4d2d	A global version of a Slice pool	2022-01-16 00:21:42 +01:00
coissac	e1b7e1761c	Change the memory management for thee BuildAlignment function	2022-01-15 19:10:16 +01:00
coissac	e8fff6477b	Work on iterators and recycling of biosequences	2022-01-14 23:11:36 +01:00
coissac	3848c54184	Refactoring	2022-01-14 15:16:41 +01:00
coissac	bb63a424e9	Remove an old test file out of interest	2022-01-14 14:59:33 +01:00
coissac	b9b9c0f179	Patch module name from oa2 to obitools	2022-01-13 23:43:01 +01:00
coissac	f53bf1b804	First commit	2022-01-13 23:27:39 +01:00