dcdaf9e372
feat: support map and slice types in OBI attributes
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Extends OBI header parsing to recognize and deserialize JSON-like arrays and objects. Introduces safe conversion utilities in `obiutils` to cast generic interface values into typed maps, and exposes them via new `BioSequence` methods. Header values are now marshaled, quote-normalized, and formatted for map and slice types.
2026-06-01 13:21:11 +02:00
235a7e202a
Update obisummary to account new obiseq.StatsOnValues type
2025-06-19 17:21:30 +02:00
f1b9ac4a13
Update the expression language
2025-05-07 20:45:05 +02:00
a57cfda675
Make the replace function of the eval language accepting regex
2025-04-10 15:17:15 +02:00
0df082da06
Adds possibility to extract a taxonomy from taxonomic path included in sequence files
2025-01-30 11:18:21 +01:00
4e4fac491f
Fisrt versin of the two levels indexing
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Former-commit-id: 4d86483bc120e27cb6f5d2c216596d410274fc69
2024-07-12 15:17:48 +02:00
55ce36f329
Update of obipcr and homogenization of logging
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Former-commit-id: 46abf47c19ace5248042c02cf1f81d9f6c12eb10
2024-05-16 15:18:30 +02:00
coissac
8620ea1637
First version of obimatrix
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Former-commit-id: 6e09eb0dd75bc688a6c83ef40dd88658fb1b296e
2023-11-12 20:40:56 +01:00
coissac
d23a911080
Change the way sequence definition are managed. They are now when present stored as an attribute
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Former-commit-id: 6e618377c05b42937d2eace3c9668390980ab68c
2023-10-05 07:21:12 +02:00
coissac
9bf006af93
A first prototype for the space of sequences
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Former-commit-id: 07dc6ef044b5b6a6fb45dc2acb01dffe71a96195
2023-08-27 14:58:55 +02:00
Eric Coissac
coissac