mirror of
https://github.com/metabarcoding/obitools4.git
synced 2026-04-30 12:00:39 +00:00
8c7017a99d
- Update obioptions.Version from "Release 4.4.29" to "/v/ Release v5" - Update version.txt from 4.29 → .30 (automated by Makefile)
31 lines
1.6 KiB
Markdown
31 lines
1.6 KiB
Markdown
# `obistats` Package: Normal Distribution Utilities
|
||
|
||
The `obistats` package provides a lightweight, efficient implementation of the **normal (Gaussian) distribution**, including core statistical operations.
|
||
|
||
## Core Type
|
||
- `NormalDist`: Represents a normal distribution with parameters:
|
||
- `Mu` (mean)
|
||
- `Sigma` (standard deviation)
|
||
|
||
## Predefined Constants
|
||
- `StdNormal`: A standard normal distribution (`Mu = 0`, `Sigma = 1`).
|
||
- `invSqrt2Pi`: Precomputed constant for performance optimization.
|
||
|
||
## Key Methods
|
||
| Method | Description |
|
||
|--------|-------------|
|
||
| `PDF(x)` | Computes the **probability density function** at point `x`. |
|
||
| `pdfEach(xs [])` | Vectorized PDF evaluation over a slice of values (optimized for standard normal). |
|
||
| `CDF(x)` | Computes the **cumulative distribution function** at point `x` via error function (`erfc`). |
|
||
| `cdfEach(xs [])` | Vectorized CDF evaluation over a slice. |
|
||
| `InvCDF(p)` | Computes the **inverse CDF (quantile function)** using Acklam’s algorithm with refinement. Handles edge cases (`p = 0`, `1`) and numerical stability. |
|
||
| `Rand(r *rand.Rand)` | Generates a random sample from the distribution (uses Go’s built-in `NormFloat64`). |
|
||
| `Bounds()` | Returns a practical support interval: `[Mu − 3·Sigma, Mu + 3·Sigma]` (≈99.7% coverage). |
|
||
|
||
## Implementation Notes
|
||
- Optimized paths for standard normal (`Mu = 0`, `Sigma = 1`) reduce computation cost.
|
||
- Uses Go’s standard math library (`math.Erfc`, `math.Log`, etc.).
|
||
- Designed for performance and numerical accuracy in statistical applications.
|
||
|
||
> *Note: Duplicates functionality from an internal module (`bench`), likely for reuse in public packages.*
|