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c30a22d356
Update GitHub Actions workflow to use setup-go v5 and align with latest tooling practices. Update version to 4.4.15 in version.txt and pkg/obioptions/version.go. Add comprehensive documentation for the canonical super-kmer strategy, including: - Analysis of index v1 limitations - Experimental observations on super-kmer efficiency - Detailed pipeline for building v3 index - Explanation of minimizer-canonization - Description of unitig construction and frequency filtering - Storage format specifications for v3 - Aho-Corasick matching implementation This change introduces a major improvement in index compactness and performance through the use of canonical super-kmers, unitigs, and efficient storage formats.
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2 lines
7 B
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4.4.15
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