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Switch to the speedup mode because of the slow down imposed by the new

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exonarate parametters

Former-commit-id: 30f2caea735460bcc4dfa61adde72d7da2fb6f2e
Former-commit-id: 0537c77f5bc16d766b3cbd668dcd1e1711140937
This commit is contained in:
Eric Coissac
2016-10-06 12:35:32 -03:00
parent 3d91c88058
commit e4f3081fa8
1 changed files with 6 additions and 4 deletions
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10
detectors/cds/params/default
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@ -14,12 +14,14 @@ AssignUndef TMP_CLEANUP 1
# #
# pass1: exonerate speedup # pass1: exonerate speedup
# #
AssignUndef PASS1_SPEEDUP 0 AssignUndef PASS1_SPEEDUP 1
AssignUndef PASS1_SLOWDOWN 0 AssignUndef PASS1_SLOWDOWN 0
AssignUndef PASS1_BLASTX_FILTER_IDMIN 70 AssignUndef PASS1_BLASTX_FILTER_IDMIN 80
AssignUndef PASS1_BLASTX_FILTER_NBMIN 50 AssignUndef PASS1_BLASTX_FILTER_NBMIN 20
AssignUndef PASS1_BLASTX_FILTER_NBMAX 200 AssignUndef PASS1_BLASTX_FILTER_NBMAX 50
AssignUndef PASS1_BLASTX_FILTER_COMIN 0.8
AssignUndef PASS1_BLASTX_FILTER_GCODE 11
# #
# pass1: exonerate parameters # pass1: exonerate parameters