70 Commits

Author SHA1 Message Date
536a451510 call explicitely tcsh to workaround a path bug
Former-commit-id: e6c05a695a6872dd5fb8acd96ee031844dd21fa0
Former-commit-id: 7740135e0861b796e85fce0c9c62a4793f836c2b
2016-04-13 17:32:10 +02:00
f466f5505a Change tha dash bang of the csh shell scripts
Former-commit-id: 115a1955c5883ffd0909cb05e887f70fa561b6e6
Former-commit-id: 5e6be182d5a3ec910f5deed27014227f34bd4745
2016-04-13 16:51:58 +02:00
69434c5b86 Add the latest tcsh able to deal with large PATH (at least 4096)
Former-commit-id: 32011d9b239e2c5ed93646a8173b285f377693a3
Former-commit-id: 6e804387bfacfc4e9242ef3f7014642044f3aa2c
2016-04-13 16:21:50 +02:00
ab37af3b03 Add the name of the org.annot pipeline in the CDS inference
Former-commit-id: 497194fafc15da0d80ee7dcb4cf11551d21061bd
Former-commit-id: ea502a0d75d7ff638258a5a15b8ff759cd6e28fa
2015-12-18 08:56:55 +01:00
b7282fb30d minor addition in cds/compare
Former-commit-id: e865ea931fb2fc76f49b72d823eda712138647e3
Former-commit-id: 3d8d2bd249907fa4fbb7fae2ee06cf6090f62d5e
2015-11-15 13:13:36 +01:00
2d404b5b24 removed need of R igraph from chlorodb/subdb
Former-commit-id: 574aace9be5804d728a877110f5f475d61644f75
Former-commit-id: 2e7ea63447643830a62f18a364327d7b396ec140
2015-11-14 22:13:55 +01:00
d83201fd2f minor bug in chlorodb
Former-commit-id: 7017655ac86e7b7837c7b581bf8a1abb86c08b30
Former-commit-id: dcedd4e32e3c7ce302eed94abd2b975a4506df97
2015-11-14 15:16:16 +01:00
6f43ede11e cds test on core and shell
Former-commit-id: 9be1f2c23d00a2678489090c4f6d04ffc0124061
Former-commit-id: 823ca0890900bf6f81b158cafc46c78049fcf080
2015-11-13 22:41:34 +01:00
405631f527 cds go_test bug fixed
Former-commit-id: f73133dca83d02a0c223e98a3ac82fdb0d03c5ae
Former-commit-id: 3db7c0037f7c109f4479490480d4323a55206c6a
2015-11-13 22:37:22 +01:00
42707c281c added test for chlorodb
Former-commit-id: 639cbbdc91a6c7f11544dbbe1fa0c47e1e28eaad
Former-commit-id: 59f6ff3f727d01f3ed4d553a554b322b24119b06
2015-11-13 18:53:47 +01:00
13b03062d5 add doc for chlorodb
Former-commit-id: 55fd288275b46bd02170029b9bc683ad34c3c611
Former-commit-id: 329bedc41c4355741a5bbd3f2056ac1025f3da7f
2015-11-13 17:55:24 +01:00
e4d6a8484d cds/tools/chlorodb added
Former-commit-id: 0579e878a69b7c285ca71870e9ca5730649a2fda
Former-commit-id: 7cced5b488441d87bf070a9a444317db0e048880
2015-11-13 17:41:18 +01:00
0d5f0c1f20 summary added in comparison
Former-commit-id: 9a267727234dc9026ce3a54f543e62d8f609945a
Former-commit-id: 556a34a214aea8824f34d4a2c117f09527d88146
2015-11-11 18:51:15 +01:00
9108ce75f1 fixed too many partial CDS bug
Former-commit-id: d733a46f4e92f755f38e452f03a28062de6739f1
Former-commit-id: 36bdc324d2b9a0491d07d40a7e68a4cf7ea73984
2015-11-10 22:15:01 +01:00
262995a486 added cds/tools compare and chrlorodb
Former-commit-id: 31633e6bc503eb08ddb507e58e3ab1a6d2ba6027
Former-commit-id: 830c771b5453f3482f283ee069234a34127bf08f
2015-11-10 09:29:05 +01:00
d77a0dfe67 added cds/tools/compare
Former-commit-id: 07fb256bf17db3f0ffc1730b0383f8255fbb9129
Former-commit-id: fd6a1fe72a39c5633c2f9fb6de09af979c2a48f3
2015-11-09 01:15:14 +01:00
c3c2be254f go_pass1 moved to bin
Former-commit-id: 6be837df8518c9374c0a9de6ff717add6178d01b
Former-commit-id: b2e3e8200b9e14447b7eeedd70191e10cf4b8a58
2015-11-09 00:58:50 +01:00
0066211385 fixed bug : CDS product not quoted
Former-commit-id: 412798e7efc6648f611fa205e893f097c1c3f583
Former-commit-id: daaa9808ca1990dda6cd137bb2ac3aaf1fb55600
2015-11-08 20:43:18 +01:00
d55d5f65a9 default PASS1_SPEEDUP set to 0
Former-commit-id: 38d036b8626c4595e734669d7c120905d1cd0698
Former-commit-id: 5e6fe77559323483bcbb133521acc6382c252d5e
2015-11-08 18:52:59 +01:00
8dab2d56b2 CDS detector added
Former-commit-id: 93fac7a70052d06c2a12bf8af59820c653edd31b
Former-commit-id: 0869fdad0f550941a0f78f1e4c57f4fcdb3f6076
2015-11-08 14:28:05 +01:00