831669433e
Switch to a swissprot based reference database for CDS annotation
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2022-02-16 22:50:17 +01:00
59fcad1c42
Adds detection of RPS12 and managment of locus tags
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2022-02-14 14:21:50 +01:00
e4627ced6e
Switch the go_cds script from tcsh to bash
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2021-11-04 13:36:28 +01:00
2c1d15c227
Adds the detection of the RPS12 gene (Gene with trans-splicing)
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2021-11-03 13:19:01 +01:00
d4da1d01fd
A new set of protein cleaned for the CDS detector prepared using the
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clusterizecore.sh script from the detectors/cds/lib folder.
The CDS detector is now modified to use the clean.fst files.
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2016-10-05 09:31:24 -03:00
8113b80d47
Add annotation of nuclear rDNA cistron
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2016-05-02 10:56:40 +02:00
644f154050
Add a fasta1line function reformating the sequence with a line for the
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header and a single line for the sequence
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2016-04-25 11:15:14 +02:00
ae703c70d6
small modifications for the luke cluster
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2015-11-09 15:27:32 +01:00
2261fa1c48
Switch from awk to gawk
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2015-11-08 19:33:00 +01:00
efb9949075
CDS detector added
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2015-11-08 14:28:57 +01:00
01c5880ace
First version including the rRNA detector
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2015-10-12 07:15:08 -03:00
c32f7cdde6
First version of the tRNA detector and of the global organnot.sh script
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2015-10-11 10:39:59 -03:00
6015339839
First version of the scripts for building the CAU tRNA database
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2015-10-10 19:12:02 -03:00
9973d1cf71
A first functionnal version of the normalize_plastid.sh script.
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2015-10-08 15:38:46 -03:00
37e1ecc9fd
Add scripts to generate reference DBs for LSC and SSC
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2015-10-07 11:32:17 -03:00
