Commit Graph

13 Commits

Author SHA1 Message Date
dd9b23bc77 Merge branch 'master' of git.metabarcoding.org:org-asm/org-annotate
Former-commit-id: 14936719198c993d2e38b2c4d8f78dfa5c46c0b4
Former-commit-id: 8e795225e073e077fbc6835b9d9746b6c6ed95cf
2015-11-10 22:15:29 +01:00
9108ce75f1 fixed too many partial CDS bug
Former-commit-id: d733a46f4e92f755f38e452f03a28062de6739f1
Former-commit-id: 36bdc324d2b9a0491d07d40a7e68a4cf7ea73984
2015-11-10 22:15:01 +01:00
ae703c70d6 small modifications for the luke cluster
Former-commit-id: 55a83611220f824a0efdb1267816f98df984152e
Former-commit-id: e01bf6440c2981904f31807766e9e48aea8b18c1
2015-11-09 15:27:32 +01:00
c3c2be254f go_pass1 moved to bin
Former-commit-id: 6be837df8518c9374c0a9de6ff717add6178d01b
Former-commit-id: b2e3e8200b9e14447b7eeedd70191e10cf4b8a58
2015-11-09 00:58:50 +01:00
2261fa1c48 Switch from awk to gawk
Former-commit-id: 70b104ab89d4c90a35925dbbcacdafaf6c1f2836
Former-commit-id: bf29abf66345cbc0ca81461064dcca63dfd4c15c
2015-11-08 19:33:00 +01:00
efb9949075 CDS detector added
Former-commit-id: a72f30f90d22cc3c7ff6059e0254e47911bb5af1
Former-commit-id: db0264bdbe5136b6e6dc44e4788175a257439643
2015-11-08 14:28:57 +01:00
8dab2d56b2 CDS detector added
Former-commit-id: 93fac7a70052d06c2a12bf8af59820c653edd31b
Former-commit-id: 0869fdad0f550941a0f78f1e4c57f4fcdb3f6076
2015-11-08 14:28:05 +01:00
01c5880ace First version including the rRNA detector
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
2015-10-12 07:15:08 -03:00
c32f7cdde6 First version of the tRNA detector and of the global organnot.sh script
Former-commit-id: f2a75cf99b24875c90c426c2afb22a75b972bf60
Former-commit-id: 65e3dfb35df06ca69bb29b690c9a40e8940ac6bf
2015-10-11 10:39:59 -03:00
6015339839 First version of the scripts for building the CAU tRNA database
Former-commit-id: 443a0446133850bb57211c27d2001241b03472bd
Former-commit-id: 8af464a0786f81dddf795f0cbda9ada9974808bf
2015-10-10 19:12:02 -03:00
9973d1cf71 A first functionnal version of the normalize_plastid.sh script.
Former-commit-id: 78c4a4d8497e6dc7185a6e5726ffc643d9ea914d
Former-commit-id: e6945818dbdbabd9cd060edb9d2578ea26671209
2015-10-08 15:38:46 -03:00
37e1ecc9fd Add scripts to generate reference DBs for LSC and SSC
Former-commit-id: 77fd69c9687bfc7cfd3305299c7c81d2a9eddada
Former-commit-id: 4d09933673c30d6a9b2b9cc985b33ef23d7a99f4
2015-10-07 11:32:17 -03:00
d298385685 First commit - second part
Former-commit-id: 202296404e6a70f8ae96db99faffb456104c57e9
Former-commit-id: 118417735d2055683607df9809c9b721cc1b1bab
2015-10-02 21:13:16 +02:00