Commit Graph

10 Commits

Author SHA1 Message Date
c691818059 Changes in .gitignore
Former-commit-id: 7e9fcd4ed6487e52562b274d87345e0e46f1458d
Former-commit-id: bf7a58dcf96db9f8c132977aa7d3f6af97cce0f5
2018-04-05 18:15:40 +02:00
466308267e Add a patch for chloroplast annotation when no inverted repeats are
detected

Former-commit-id: 7e3ddd41cf0d0788223382fedbf45b183974233e
Former-commit-id: e5a8ceb825f78d243e37d22cd6b2e91f403c0ee8
2016-05-02 15:32:28 +02:00
32908c6809 remove the debug code
Former-commit-id: 7a805dc6278b8aae97e6be8deb7e9035bc4aa853
Former-commit-id: 54e6c6030fd0c876ad05745a6a51d14a523e313e
2015-11-09 17:17:34 +01:00
195739b5f8 Patch bug in the inverted repeats annotation
Realize the annotation on the normalized chromosome


Former-commit-id: 73e4e016d7bfe23fc92e4071efb0a4629eb8e21f
Former-commit-id: d44249c0d078d475ca80386bb428fb660289b0dd
2015-11-09 17:03:22 +01:00
efb9949075 CDS detector added
Former-commit-id: a72f30f90d22cc3c7ff6059e0254e47911bb5af1
Former-commit-id: db0264bdbe5136b6e6dc44e4788175a257439643
2015-11-08 14:28:57 +01:00
c32f7cdde6 First version of the tRNA detector and of the global organnot.sh script
Former-commit-id: f2a75cf99b24875c90c426c2afb22a75b972bf60
Former-commit-id: 65e3dfb35df06ca69bb29b690c9a40e8940ac6bf
2015-10-11 10:39:59 -03:00
c402923d0f First version of if inverted repeat annotation tools
Former-commit-id: 9d13deae459b086f11ba4f0f82aac899b4ff0fd9
Former-commit-id: 74a7f07d3fb26f6ce12808b8fe2dc7f176181285
2015-10-08 17:38:01 -03:00
f901b87ccd rename the main normalization script in go_normalize.sh
Former-commit-id: e9488f88279a644134c24205c8b0a25459f55403
Former-commit-id: 1e661d834bb83a09777ab5a19dad21f2c795baa2
2015-10-08 15:44:08 -03:00
9973d1cf71 A first functionnal version of the normalize_plastid.sh script.
Former-commit-id: 78c4a4d8497e6dc7185a6e5726ffc643d9ea914d
Former-commit-id: e6945818dbdbabd9cd060edb9d2578ea26671209
2015-10-08 15:38:46 -03:00
37e1ecc9fd Add scripts to generate reference DBs for LSC and SSC
Former-commit-id: 77fd69c9687bfc7cfd3305299c7c81d2a9eddada
Former-commit-id: 4d09933673c30d6a9b2b9cc985b33ef23d7a99f4
2015-10-07 11:32:17 -03:00