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d56aeaf698
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Remove extra feature for CDS
Former-commit-id: 19b149eb57227e4ff3e7dda97f0328207fbc6373
Former-commit-id: ef94884d026004aa80d0fed85121c525cf5610b4
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2022-02-14 15:09:17 +01:00 |
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616d5d084b
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change tRNA and CDS annotations
Former-commit-id: 12b6c5605f57940e215643b80c93ffbb48d5406e
Former-commit-id: 18663d59e90e6d35b029d9087b66723487b8db1d
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2021-11-05 09:29:57 +01:00 |
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15f033332c
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Patch a bug leading to a double pseudogene tagging
Former-commit-id: 35e27b66dc2f350b72544626da12a758b40da071
Former-commit-id: d01e79b8e7450e4aa734a8d04e81573602a58fec
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2018-11-20 17:39:38 +01:00 |
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a040adb132
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Check the translation for stop codon and add a pseudogene qualifier if
present.
Former-commit-id: 11b612fcdfa1fdd2a2614148b5b1772954e62e70
Former-commit-id: 02c87c99e5ece530640e521a577867e74ed1541e
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2018-11-20 15:59:57 +01:00 |
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16b5e2927d
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Make changes to better detect pseudo genes frameshited and annotate them
correctly
Former-commit-id: d827908d63149941538e686b48f60a132173cb80
Former-commit-id: 2841c75b415c6c8fa35a6a90e23cf82c3c84408b
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2016-10-06 10:06:37 -03:00 |
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860cd217d4
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Add the management of pseudogenes
Former-commit-id: 26d91366e483cf17c440b251ab1e8ac5390699fe
Former-commit-id: 0d3d69ba351bd174fe08387a474fd1137559e38a
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2016-10-06 08:56:45 -03:00 |
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ab37af3b03
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Add the name of the org.annot pipeline in the CDS inference
Former-commit-id: 497194fafc15da0d80ee7dcb4cf11551d21061bd
Former-commit-id: ea502a0d75d7ff638258a5a15b8ff759cd6e28fa
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2015-12-18 08:56:55 +01:00 |
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405631f527
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cds go_test bug fixed
Former-commit-id: f73133dca83d02a0c223e98a3ac82fdb0d03c5ae
Former-commit-id: 3db7c0037f7c109f4479490480d4323a55206c6a
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2015-11-13 22:37:22 +01:00 |
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0066211385
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fixed bug : CDS product not quoted
Former-commit-id: 412798e7efc6648f611fa205e893f097c1c3f583
Former-commit-id: daaa9808ca1990dda6cd137bb2ac3aaf1fb55600
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2015-11-08 20:43:18 +01:00 |
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8dab2d56b2
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CDS detector added
Former-commit-id: 93fac7a70052d06c2a12bf8af59820c653edd31b
Former-commit-id: 0869fdad0f550941a0f78f1e4c57f4fcdb3f6076
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2015-11-08 14:28:05 +01:00 |
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