#
# Make chloro DB's for use by CDS prediction program
#
mkdir myDB
mkdir myDB/download
cp GBKorEMBLEntries myDB/download
[optional
cp ORG_HOME/data/cds/chlorodb/parameters.sh myDB
<edit> myDB/parameters.sh
]
go_chlorodb.sh myDB
and... wait... (typical time : 5h for 500 Entries)
then (after checking)
mv ORG_HOME/data/cds/chlorodb ORG_HOME/data/cds/chlorodb.old
mv myDB ORG_HOME/data/cds/chlorodb
#
# notes
#
calculation of models currently requires R
(without any specific package) this will be
replaced in the future...
in addition, optional graphics output (plot.models.r)
requires the following graphic packages :
grid
gridExtra
vcd
plotrix
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