2d404b5b24
Former-commit-id: 574aace9be5804d728a877110f5f475d61644f75 Former-commit-id: 2e7ea63447643830a62f18a364327d7b396ec140
38 lines
717 B
Plaintext
38 lines
717 B
Plaintext
#
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# Make chloro DB's for use by CDS prediction program
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#
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mkdir myDB
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mkdir myDB/download
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cp GBKorEMBLEntries myDB/download
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[optional
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cp ORG_HOME/data/cds/chlorodb/parameters.sh myDB
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<edit> myDB/parameters.sh
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]
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go_chlorodb.sh myDB
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and... wait... (typical time : 5h for 500 Entries)
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then (after checking)
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mv ORG_HOME/data/cds/chlorodb ORG_HOME/data/cds/chlorodb.old
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mv myDB ORG_HOME/data/cds/chlorodb
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#
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# notes
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#
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calculation of models currently requires R
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(without any specific package) this will be
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replaced in the future...
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in addition, optional graphics output (plot.models.r)
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requires the following graphic packages :
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grid
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gridExtra
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vcd
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plotrix
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