Eric Coissac
eb2bd2ce05
Former-commit-id: 9b7bbd0431dbb98a7003291bf3964cac5a8b5b31 Former-commit-id: 78ea944e8e00fdfbb6ef0971aebbdbda0075828e
61 lines
1.2 KiB
Markdown
61 lines
1.2 KiB
Markdown
# ORG.Annot - Organelle Annotator
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**version 1.0.0 - Sept 2015**
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## -1- Installation
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# First check if binaries have been already compiled for your port
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```bash
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scripts/check_port.sh
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```
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if it prints :
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```
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checking port compilation OK
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```
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then everything is fine
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if it prints :
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```
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port not yet compiled
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```
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then, you should first compile binaries for your port
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please consult: src/README.txt for details
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if it prints something like
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```
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XXX version A.B.C (should be >= X.Y.Z)
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please consider installing XXX from src/_unix_tools_
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```
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then, you should first compile some unix tools binaries for your port
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please consult: `src/README.txt` for details
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## -2- Distribution organisation
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- config : config file for (re)compiling tools
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- data : internal data files (e.g. ChloroDB)
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- detectors : features specific detector scripts
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- ports : binaries for various ports
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- scripts : main scripts directory
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- src : sources for (re)compiling tools
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## -3- Usage
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> note: all scripts are located in scripts, so you may add
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> this directory in your path
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> e.g. using csh
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> set path = ($path <ROOTDIR>/scripts)
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@TODO : scripts description
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test
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